Gene Information

Name : LMRG_01288 (LMRG_01288)
Accession : YP_005962794.1
Strain : Listeria monocytogenes 10403S
Genome accession: NC_017544
Putative virulence/resistance : Resistance
Product : cystathionine beta-lyase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1693354 - 1694526 bp
Length : 1173 bp
Strand : -
Note : -

DNA sequence :
GTGGCTAAAGAATACGCGCAAGATACGGCTGTAATTAAAGCGAGCCTCGGGATTGATAAAGAAACAGGTGCGCTTAATAC
GCCGATTCATTTATCTTCTACTTTCCATCAACATGATTTTGATAACTACCATGCTTATGATTATGCAAGAAGTGGAAACC
CAACCAGGGGAAAAGTGGAACAGGCGATTGCAGAATTGGAAGGTGGTACGAATGGTTTTGCCTTTGCTAGTGGAATGGCG
GCTGTTTCTGTGGCACTTTTTACGCTTTCAAAAGGAGATCATTTTATTATTGCAAAAGATGTGTACGGCGGGACGTTTCG
TTTGGTGGAACAAGTGTTGCCGCGGTTTGGGATTACGCATACTTTTGTTGATACAACAAATATTGACGAGGTTGCTAAGG
CGTTTCAAGCAAATACAAAATTGGTTTATTTGGAAACTCCTTCTAATCCGCTGCTACATGTGACGGATATTCGCACAGTT
GCTAAACTTGCGAAAGCGAATGGTTGCTATACATTTGTCGATAATACATTTTTAACGCCGCTGATTCAAAAACCGTTAGA
ATTAGGTGCGGACTTAGTTATCCATAGTGCGACGAAATTTCTTGGTGGGCATAGTGATATTTTGGCGGGGCTAATTGTCA
CAAATAATCCTAATCTTGCTGAAGCAGTGTACTTTTTGCAAAATTCGACTGGTGGGGTTCTTGGAGTGCAGGATTCGTGG
TTGTTATTGCGCGGACTAAAAACACTTTCTGTGCGGATGAAGGCTGGGACGGAAACGGCGGAGAAAATTGCGCTATTTTT
AAATGCGGAGCCAGATGTGGTTGCGGTGCATTATCCGGGGTTACCGTCGCATGCGGGGTATGACATTCAAGTGGAACAGG
CGACAAGTGGCGGGGCTGTTTTATCGTTTGATTTAGGCAGTGAGGAAGCGGTGCGAGAACTAGTTACACATTTGGAATTG
CCAGTGTTCTCTGTGAGTCTAGGTGCGGTCGAGAGTATTCTTTCTTACCCGGCTAAAATGTCTCATGCGGCTGTTCCGGA
AGAGGAACGTTTGGCGCAAGGGATTACGCCAGGATTATTACGTTTTTCAGCTGGACTAGAAGATGCTGAAGACTTGATTG
CAGATTTAAAACAAGCACTTTCATTCATTAAGAAGGGAAGTGTTGCGAAGTGA

Protein sequence :
MAKEYAQDTAVIKASLGIDKETGALNTPIHLSSTFHQHDFDNYHAYDYARSGNPTRGKVEQAIAELEGGTNGFAFASGMA
AVSVALFTLSKGDHFIIAKDVYGGTFRLVEQVLPRFGITHTFVDTTNIDEVAKAFQANTKLVYLETPSNPLLHVTDIRTV
AKLAKANGCYTFVDNTFLTPLIQKPLELGADLVIHSATKFLGGHSDILAGLIVTNNPNLAEAVYFLQNSTGGVLGVQDSW
LLLRGLKTLSVRMKAGTETAEKIALFLNAEPDVVAVHYPGLPSHAGYDIQVEQATSGGAVLSFDLGSEEAVRELVTHLEL
PVFSVSLGAVESILSYPAKMSHAAVPEEERLAQGITPGLLRFSAGLEDAEDLIADLKQALSFIKKGSVAK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAR0460 YP_039909.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 7e-82 48
SAS0418 YP_042545.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 4e-83 48
metB YP_281510.1 cystathionine beta-lyase Not tested Not named Protein 7e-80 46

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LMRG_01288 YP_005962794.1 cystathionine beta-lyase BAC0207 Protein 3e-59 43