Gene Information

Name : yaaD (PPM_0082)
Accession : YP_005957726.1
Strain : Paenibacillus polymyxa M1
Genome accession: NC_017542
Putative virulence/resistance : Unknown
Product : pyridoxal biosynthesis lyase pdxS
Function : -
COG functional category : -
COG ID : -
EC number : 4.-.-.-
Position : 121659 - 122540 bp
Length : 882 bp
Strand : +
Note : -

DNA sequence :
ATGGAAACGGGAACTTCGCGTGTAAAAAGAGGTATGGCAGAGATGCAAAAAGGTGGCGTAATCATGGATGTCATGAACGC
TGAACAGGCTAAAATTGCAGAGGCAGCAGGCGCTACAGCCGTAATGGCTCTTGAACGAGTGCCTTCGGATATCCGTGCAG
CTGGTGGGGTTGCTCGTATGGCTGACCCTACGATTGTGGAAGAGGTTATGAAGGTTGTTTCTATTCCTGTTATGGCTAAG
GCTCGTATTGGTCACTTTGTTGAGGCAAAGGTACTCGAATCTCTCGGTGTTGACTATCTCGATGAGAGTGAAGTATTGAC
ACCTGCAGATGAGGTGTTCCATATCGATAAGCGGGAGTTCACTGTTCCATTTGTTTGTGGAGCCAAGGATCTAGGGGAAG
CATTGCGTCGTATCGGTGAAGGCGCATCTATGATCCGTACAAAGGGTGAGCCGGGAACTGGAAATATTGTTGAGGCTGTT
CGTCACATGCGGTTTATTAATGGTCAAATTCGCAAGGTGCAAAACCTGTCGAAGGACGAGCTGTATGCAGAAGCGAAAAA
CCTCGGAGTTGCTTATGAACTGCTGTTGGAAGTGCATGAGCTTGGTAAGCTACCAGTGGTCAACTTTGCAGCAGGCGGTG
TAGCAACACCTGCGGATGCTGCGTTGATGATGCATTTAGGCGCTGATGGTGTCTTTGTAGGCTCTGGTATCTTCAAGTCG
GACAGCCCTGAGAAATTTGCACGGGCAATTGTGGAAGCGACCACTCATTACACAGATTACAAGCTGATTGCAGAAGTGTC
CAAGAATTTGGGAACACCTATGAAAGGCATTGAAATTTCCAAACTGGCATCGCATGAGCGCATGCAGGATCGTGGTTGGT
AA

Protein sequence :
METGTSRVKRGMAEMQKGGVIMDVMNAEQAKIAEAAGATAVMALERVPSDIRAAGGVARMADPTIVEEVMKVVSIPVMAK
ARIGHFVEAKVLESLGVDYLDESEVLTPADEVFHIDKREFTVPFVCGAKDLGEALRRIGEGASMIRTKGEPGTGNIVEAV
RHMRFINGQIRKVQNLSKDELYAEAKNLGVAYELLLEVHELGKLPVVNFAAGGVATPADAALMMHLGADGVFVGSGIFKS
DSPEKFARAIVEATTHYTDYKLIAEVSKNLGTPMKGIEISKLASHERMQDRGW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
DIP0227 NP_938620.1 pyridoxal biosynthesis lyase PdxS Not tested Not named Protein 8e-82 65
pdxS YP_005137204.1 pyridoxine biosynthesis protein Not tested Not named Protein 6e-82 65
pdxS YP_005141805.1 pyridoxine biosynthesis protein Not tested Not named Protein 1e-81 65