Gene Information

Name : yfmE (PPM_0803)
Accession : YP_005958447.1
Strain : Paenibacillus polymyxa M1
Genome accession: NC_017542
Putative virulence/resistance : Virulence
Product : Vitamin B12 import system permease protein btuC
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 964264 - 965241 bp
Length : 978 bp
Strand : -
Note : -

DNA sequence : 
ATGAAAAAGCTGTGGATTTTACTCGTGTTAATGCTGGGTGTTTCCTTTGTAGCTATCGGCGTGGGTAGCACCTACATTAC
ACCCGCTGAGCTGATCGCCGCTCTGACTGACCGAAATGCCTCTTCCTGGTTCATCGTTCACCATTACCGACTGCCTCGTG
GCCTGCTGGCCATCATGGCCGGTGCTGGCCTTGCAGTAGCTGGCGTGCTGCTGCAAGGTATGATCCGCAACCCACTGGCT
TCGCCGGATGTGGTGGGTGTATCCAAGGGAGCCGGCTTTGCTGCGGTTCTCGTCATCGTGCTGCTCCCCTCATCCCCCGT
GGCGCTATTGCCTGTAGCTGCCTTTGTCGGTGCCGGATTAGCTGCACTACTGCTCGTACAGCTTTCGATGAAGGGGGGCA
TGCGTCCTAACATGCTAGCCTTAACCGGGCTGGCGGTAGGTGCTATTTTTCAGGCTGCAACCGATTATATTCTGGTCAAA
TATCCACTTGAAGCCAGCGATACGCTGACTTGGCTAGCTGGAAGTCTGTGGGGCAAAGGCTGGGATGAAGTATATGGACT
TTTGCCATGGTTAATTGTATTGCTGCCTCTAGCCTATACGCTACAGCGCAAGCTGGATATTATGAGTCTGGATGAGGAAA
GCTCCGCTGGCTTGGGACTTAGCGTGAAGCGTATGCGCACAGGATTGCTGGCCGTATCCGTGGCCTTAGCTGCTTCCTGT
GTCGCTGCCATCGGCTCCATCGGTTTTATAGGACTGCTGGCACCACATCTGGCGCGGCGTTTGTTTGGCAATCGCCACCG
CTATCTATTGCCCGGCGCAGCCATGATCGGTGCCCTGATTCTCGTCCTTGCCGATGCGCTCGGACGGGGGCTGAAGCCGC
CGCTCGAAATTCCTGCTGGCATCGTGACAGCCGTGATTGGCGCGCCCTATTTCCTGTATCTCTTGCTACGGGAACGCAAG
CAAAAAAGCAGCGGATAA

Protein sequence : 
MKKLWILLVLMLGVSFVAIGVGSTYITPAELIAALTDRNASSWFIVHHYRLPRGLLAIMAGAGLAVAGVLLQGMIRNPLA
SPDVVGVSKGAGFAAVLVIVLLPSSPVALLPVAAFVGAGLAALLLVQLSMKGGMRPNMLALTGLAVGAIFQAATDYILVK
YPLEASDTLTWLAGSLWGKGWDEVYGLLPWLIVLLPLAYTLQRKLDIMSLDEESSAGLGLSVKRMRTGLLAVSVALAASC
VAAIGSIGFIGLLAPHLARRLFGNRHRYLLPGAAMIGALILVLADALGRGLKPPLEIPAGIVTAVIGAPYFLYLLLRERK
QKSSG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fecD AAL08452.1 FecD Virulence SRL Protein 7e-26 48

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
yfmE YP_005958447.1 Vitamin B12 import system permease protein btuC BAC0163 Protein 4e-26 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
yfmE YP_005958447.1 Vitamin B12 import system permease protein btuC VFG1043 Protein 4e-26 48