Gene Information

Name : ycbJ (PPM_0657)
Accession : YP_005958301.1
Strain : Paenibacillus polymyxa M1
Genome accession: NC_017542
Putative virulence/resistance : Resistance
Product : uncharacterized protein ycbJ
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 803826 - 804776 bp
Length : 951 bp
Strand : -
Note : -

DNA sequence : 
ATGACTGAAAAGCGTCCCTTGACTAACTCAAAAGATGTTAGCGATATATTGGCCCTTGCCCAAAGCAACGGGCTTCACAT
ACGACATGAAGGATTGGAGCTCAACGAGTCCGGGCTGGATTTCCGGGCCCTATTCGCCAAAGACGTTCAGGGTACCCCTT
GGGTTTTACGTACACCGCGACGAATAGATGTGGTCCAATCAGCGGCTTACGAGCACAAAGTGCTTCGGTTGATTCGTGAT
ACGCTACCTGTAGCGGTACCGGATTGGCAGGTATATAGTCCAGAGTTCATCGCCTATCCTCAGCTGGAGGGCACTCCTGC
CGCTACTATTGATATGGAAACAAAAAGCTATGTATGGTTCATCAACCCAGATGCTCTGACGGATAGATTCGTTGCTTCGC
TCGCTAAAGCCTTAGCCGCGTTGCACCAGACGGATCACCGACGGGCAGCCGATTTCGGTGTCCGCGTAAAGCAACACGAC
GAAGTTCGGCACTTAATGGGTCAGCGAATGGAAGAAACACAGCGCGTCTTTGGTGTATCCGGGGAGCTGTGGCAACGATG
GCAGGCCTGGCTGGCAGATGATAGCTACTGGCCGGAATATTCCGCACTTGTCCACGGCGATCTGCACCCAGGCCATATTC
TAGTCTCATCGAATACAGAGGTTACTGGAATGCTGGACTGGACCGAGGCCGAAGTAGCTGATCCAGCGATTGATTTTACG
AGTTACTATACTTTGTTCGGAGAAGTAGAGCTTGCTCGTCTATTGAAGTTTTACAAGGCAGCAGGCGGACGTGTATGGCC
GCGTATGAGCGAACACATCATTGAACTGACCGCGGCTTACCCTGTGCTTATCGCCGAATTCGCCCTCAAATCCGGACTAG
ATGAATATATGGAGATGGCACGTAACGCGCTGGGTGTTCATAAGCAAGAAGAAGGACTGCCCGACATATAA

Protein sequence : 
MTEKRPLTNSKDVSDILALAQSNGLHIRHEGLELNESGLDFRALFAKDVQGTPWVLRTPRRIDVVQSAAYEHKVLRLIRD
TLPVAVPDWQVYSPEFIAYPQLEGTPAATIDMETKSYVWFINPDALTDRFVASLAKALAALHQTDHRRAADFGVRVKQHD
EVRHLMGQRMEETQRVFGVSGELWQRWQAWLADDSYWPEYSALVHGDLHPGHILVSSNTEVTGMLDWTEAEVADPAIDFT
SYYTLFGEVELARLLKFYKAAGGRVWPRMSEHIIELTAAYPVLIAEFALKSGLDEYMEMARNALGVHKQEEGLPDI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
mphBM YP_254221.1 macrolide 2'-phosphotransferase II Not tested ¥ðSh1 Protein 1e-65 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ycbJ YP_005958301.1 uncharacterized protein ycbJ D85892.gene.p01 Protein 4e-68 46
ycbJ YP_005958301.1 uncharacterized protein ycbJ AB013298.gene.p01 Protein 9e-66 43
ycbJ YP_005958301.1 uncharacterized protein ycbJ AF167161.gene.p01 Protein 6e-66 43
ycbJ YP_005958301.1 uncharacterized protein ycbJ AB092817.1.orf0.gene Protein 9e-66 43
ycbJ YP_005958301.1 uncharacterized protein ycbJ D16251.1.orf0.gene.p Protein 2e-53 43