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Name : treC (PPM_0627) Accession : YP_005958271.1 Strain : Paenibacillus polymyxa M1 Genome accession: NC_017542 Putative virulence/resistance : Unknown Product : trehalose-6-phosphate hydrolase Function : - COG functional category : - COG ID : - EC number : 3.2.1.93 Position : 764764 - 766491 bp Length : 1728 bp Strand : + Note : - DNA sequence : ATGGAAGCAATGAACAAGGCTTTAATTCCTCAAGATAAGGACTGGTGGCGCAAATCGGTCGTCTATCAGGTTTATCCCAA AAGTTTTAACGATACGACGGGCAAAGGAACCGGTGATATAAGAGGACTGACACAAAAGCTGGATTATCTGCAAGGACTGG GTGTTGATATTATCTGGTTGCAGCCTGTATATGTCTCGCCACAACGTGATAACGGGTATGATGTAGCCGATTATTGCCGG ATTAATCCTGACTATGGAACAATGCAGGATTTTGAAGAATTGAGCCGGGAAATTCGGGCGCGTGGGATGCACTTGATGAT CGACATCGTGGTTAACCATTCTTCCACAGAGCATGTCTGGTTTCAGCAGGCGCGGCTTTCTAAGGATAGTGAGTACAGGG ACTATTATATCTGGCGTGACCCAGCACCCGATGGAGGACCTCCGAACAACTGGATTTCCAAGTTTGGTGGACCAGCTTGG CAGTATGACGAGGCTACAAACCAATATTTCTTGACACTGTTTGATAAGACGCAGGCGGATTTAAACTGGGAAAATCCCAA AGTTCGTCAGGAAGTTGTTCATGTGCTGGAATTTTGGGCAGAGAAGGGAGTTAGTGGCTTCCGACTTGATGTCATTAATT TGATCTCCAAAGATCGGCAATTCTCGGACGACGATGGAAGCACGGCTCCTGGAGACGGGCGTAAGTATTATACGGACGGT CCGCATGTACATGAATACCTTCATGAATTACATGAGAAAGTATTCTCACTGTATAACAGTGTCACTGTAGGGGAGATGTC CTCCACCTCACTGGATCACTGTATCCGTTATTCCAATCCAGACAGAAAAGAATTATCCATGACCTTTAATTTTCATCATT TGAAGGTGGATTATCCCAATGGGCAAAAGTGGGAACTCATGCCTTATGATTTTGAAATGCTGAAAAAGCTATTCTCGGAT TGGCAGATTGGCATGCAACAGGGTGGCGGCTGGAGTGCATTGTTTTTTAACAATCATGATCAGCCAAGAGCGATCTCTCG CTTTTTGGATGATGATGAATACCATGTGGAGAGCGCCAAGCTACTGGCAACCACGCTACATGGACTTCAAGGAACACCTT ATATATTTCAAGGTGAAGAGATCGGAATGCCCAATCCGCAGTGGTCAGATATTGAAGAATTCCGTGATGTTGAATCGCTG AATATGTATGGTATTTTGCAGGAGAAAGGTAAAAGTGCAGAGGAAGCATTGGATATCATTCGAGAGCGGTCTCGTGATAA TTCGAGGACACCGATGCAGTGGGATAACACTCGCAATGCGGGCTTCACTACAGGCACGCCTTGGATTAAGGTAGATGAAC GATATCCACAGATCAACGTTCAGTCTCAGTTAGAGGACCCGAACTCGATCTACAGCCATTACCGTAAGCTGATTCGTCTG CGTAAGACGGTACAGGTCATCACCGATGGGGATTACCAACGTTTGGACGAAGCTCATCCTCAGGTCTACGCATATCAACG CAGCAATGAACAGGAGACTTTGGTCGTCATCTCTAATTTTAGTGGGCGGGATGTACAATTCCGTATACCGGATTCATTTT ATTTATCATTAGATAATCAAGCAGTAGCAGCGGCTGAGCTTTTAATCGGTAATACCCAGTATGCTCCGCAGCTAAATCAG GTGGTCTCTTTGACTCCGTATGCTTCCTATATGTGGATTGTTCGTTAA Protein sequence : MEAMNKALIPQDKDWWRKSVVYQVYPKSFNDTTGKGTGDIRGLTQKLDYLQGLGVDIIWLQPVYVSPQRDNGYDVADYCR INPDYGTMQDFEELSREIRARGMHLMIDIVVNHSSTEHVWFQQARLSKDSEYRDYYIWRDPAPDGGPPNNWISKFGGPAW QYDEATNQYFLTLFDKTQADLNWENPKVRQEVVHVLEFWAEKGVSGFRLDVINLISKDRQFSDDDGSTAPGDGRKYYTDG PHVHEYLHELHEKVFSLYNSVTVGEMSSTSLDHCIRYSNPDRKELSMTFNFHHLKVDYPNGQKWELMPYDFEMLKKLFSD WQIGMQQGGGWSALFFNNHDQPRAISRFLDDDEYHVESAKLLATTLHGLQGTPYIFQGEEIGMPNPQWSDIEEFRDVESL NMYGILQEKGKSAEEALDIIRERSRDNSRTPMQWDNTRNAGFTTGTPWIKVDERYPQINVQSQLEDPNSIYSHYRKLIRL RKTVQVITDGDYQRLDEAHPQVYAYQRSNEQETLVVISNFSGRDVQFRIPDSFYLSLDNQAVAAAELLIGNTQYAPQLNQ VVSLTPYASYMWIVR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| malL | YP_251987.1 | oligosaccharide alpha-1,6-glucosidase | Not tested | SCCmec | Protein | 4e-124 | 47 |
