Gene Information

Name : arsB3 (PPM_4372)
Accession : YP_008049936.1
Strain : Paenibacillus polymyxa M1
Genome accession: NC_017542
Putative virulence/resistance : Resistance
Product : Arsenical pump membrane protein Arsenic efflux pump protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5037109 - 5038416 bp
Length : 1308 bp
Strand : -
Note : -

DNA sequence :
ATGGAGGTTTTTAAAACATTGATTTTTTTGGCATGCATTATATTCTTAGTCACTTTAGTATTGGTCATCTGGCAGCCTAA
ACATCTGTCCATTGGGTGGTCTGCGTGCGGCGGTGCCATACTCGCCTTGCTGGTGGGGGTGGTGGATTTGCATGATGTTT
GGGAAGTTACTCGAATGGTCTGGAATGCAACACTAGCTTTTGTCGCCATTATACTGATTTCATTAGTCCTTGATAAAATT
GGTTTCTTCGAATGGGCAGCACTTCACATGGCACGGCTAGCCCGTGGAAGCGGAACCCGGATGTTTGTCTATGTGAGCCT
GCTGGGTGCCGTAGTTGCTGCCTTTTTTGCCAATGACGGCGCGGCTTTAATTTTGACACCAATTGTACTGGCGATGGTTC
GGGCACTGAAATTGGATGAGAAAATGGTATTTCCTTTTATCATAGCGAGCGGATTTATTGCAGATACGACATCGCTTCCG
CTTGTAGTCAGCAACCTCGTTAATATTGTGTCAGCCGATTTCTTTGGAATCAGTTTTATGGAATATGCGAGTCGTATGAT
TGTACCAAATCTGTTTTCCTTAGCGGCTAGTATCGTGGTACTGTATCTCTTTTTTCGCAAAAAAATTCCTAAAACGTTTG
ATGCGACACAGTTAATCACGCCTGCAAATGCGATAAAAGATCCAAAGATGTTCCGTATGTCCTGGGTCGTTCTCACAATA
TTGTTGGTTGGCTACTTTGCATGCGAATTTTTTGACATTCCCGTCTCGGTGGTGGCTGGTATCATTGCCATCCTTTTCTT
GCTGATGGCTAGAAGAAGCCCTGTGGTACCCATGAAAGAAGTCATCAAGGGAGCTCCATGGGCCATCGTATTTTTCTCTA
TCGGGATGTATGTGGTGGTGTATGGTCTGCGTAATGCCGGTTTGACGGATCTGCTGTCCCATGTGATTCAAGCGGCTGCT
GATCAAGGTATGTTTGTAGCTACCATGGCCATGGGTTTTATTGCGGCGATTATCTCGTCGAGTATGAATAACTTGCCCAC
GGTCATGATTGATGCACTTGCCATTAATGCCACTCATGCAACCAGTATGGTCAAAGAGGCACTGATTTATGCTAACGTCA
TTGGGTCGGATCTTGGACCAAAAATAACTCCAATCGGTTCATTAGCCACATTGTTGTGGCTACATGTACTTCGTTCCAAA
AACGTAAAAATTTCTTGGGGCACTTATTTCAAAACAGGCATCGTCTTAACTATTCCTACACTTTTTATTACCCTGCTGGG
CTTATATCTATGGTTAATCATTTCATAA

Protein sequence :
MEVFKTLIFLACIIFLVTLVLVIWQPKHLSIGWSACGGAILALLVGVVDLHDVWEVTRMVWNATLAFVAIILISLVLDKI
GFFEWAALHMARLARGSGTRMFVYVSLLGAVVAAFFANDGAALILTPIVLAMVRALKLDEKMVFPFIIASGFIADTTSLP
LVVSNLVNIVSADFFGISFMEYASRMIVPNLFSLAASIVVLYLFFRKKIPKTFDATQLITPANAIKDPKMFRMSWVVLTI
LLVGYFACEFFDIPVSVVAGIIAILFLLMARRSPVVPMKEVIKGAPWAIVFFSIGMYVVVYGLRNAGLTDLLSHVIQAAA
DQGMFVATMAMGFIAAIISSSMNNLPTVMIDALAINATHATSMVKEALIYANVIGSDLGPKITPIGSLATLLWLHVLRSK
NVKISWGTYFKTGIVLTIPTLFITLLGLYLWLIIS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
arsB YP_252017.1 arsenical pump membrane protein Not tested SCCmec Protein 2e-135 69
arsB YP_005754065.1 arsenical pump membrane protein Not tested Type-XI SCCmec Protein 8e-132 68
SH0109 YP_252024.1 arsenical pump membrane protein Not tested SCCmec Protein 9e-138 68
arsB2 YP_001007633.1 arsenical pump membrane protein Not tested YAPI Protein 1e-112 58

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
arsB3 YP_008049936.1 Arsenical pump membrane protein Arsenic efflux pump protein BAC0574 Protein 2e-135 68
arsB3 YP_008049936.1 Arsenical pump membrane protein Arsenic efflux pump protein BAC0575 Protein 2e-139 68
arsB3 YP_008049936.1 Arsenical pump membrane protein Arsenic efflux pump protein BAC0576 Protein 6e-112 59
arsB3 YP_008049936.1 Arsenical pump membrane protein Arsenic efflux pump protein BAC0578 Protein 4e-112 59
arsB3 YP_008049936.1 Arsenical pump membrane protein Arsenic efflux pump protein BAC0031 Protein 6e-109 58
arsB3 YP_008049936.1 Arsenical pump membrane protein Arsenic efflux pump protein BAC0577 Protein 5e-110 57