Gene Information

Name : xylA3 (PPM_4272)
Accession : YP_008049836.1
Strain : Paenibacillus polymyxa M1
Genome accession: NC_017542
Putative virulence/resistance : Unknown
Product : xylose isomerase
Function : -
COG functional category : -
COG ID : -
EC number : 5.3.1.5
Position : 4922156 - 4923472 bp
Length : 1317 bp
Strand : -
Note : -

DNA sequence :
ATGGCTTATTTCGAACAAGTATCCAAAATTAACTTTGAGGGCAAGCAATCCGATAATCCTTTTGCGTTCAAATTTTATAA
TCCTCAGGAAATAGTAGCGGGAAAAACGATGGAGGAGCATTTGCGTTTTAGTATGGCCTATTGGCATACACTGGTTGCAG
GCGGCTCTGATCCTTTTGGAGTAGAGACTGCGGAACGCCCATGGTCCAAGTTTACCGGACTTGATTTGGCGAAGGCACGT
GTGGAAGCTGCCTTTGAGCTGCTGGATAAACTGAATTTACCTTATTTCGCCTTCCACGATGTGGATATTGCTCCTGAAGG
CGCGTCACTGAAGGAATTTTACAGCAATCTGGATACCATCGTGGATCTGATTGAGGAGCACATGAAGGCTACGGGGAAAA
AGCTGCTGTGGAACACGGCGAACATGTTTAGCCATCCACGTTATTTGCATGGAGCTGCGACGACTTGCAATGCAGATGTA
TACGCACACGCAGCTGCCCAAATTAAAAAAGGACTGGAAGTAGGCAAACGTCTGGGCGCAGATAACTACGTATTCTGGGG
AGGCCGTGAAGGCTATGAAACACTGCTGAATACAGATTTGAAGTTGGAACAGGACAATCTGGGACGGATGTTCCATATGG
CCGTGGACTACGCGCGTGAAATCGGCTTTGACGCTCAATTCCTGATTGAGCCAAAACCGAAGGAGCCAACCAAGCATCAG
TATGATTTTGATGCGGCGACGACGATTGCCTTCCTGCAAAAATATGATCTGGATCAGCATTTCAAGCTTAATCTGGAAGC
TAACCATGCCACTTTGGCGGGTCATACTTTTGATCATGAAGTACGTGTAGCACGGGTTAACGGCATGTTGGGTTCCCTGG
ATGCCAACCAAGGTGATTTGCTGCTGGGCTGGGATACGGACGAATTCCCGGTTGATCTGTATGATGCCACACTAACCATG
TATGAAGTACTGCAAAATGAAGGATTAGGCCGTGGCGGTATCAACTTTGATGCCAAGGTGCGCAGAGCATCGTTTGAACC
AGAAGATTTGTTCCTCGCGCACATCGCAGGTATGGATACGTATGCGAAAGGGTTGAAGGTAGCCGCCAAACTGATCGAGG
ATCGTGTGTTTGAGGACTTTATTGAGAAGCGGTACAGCAGCTTTAAAGAAGGCATTGGAGCAGACATTGTATCCGGAAAA
GCAACGCTTGCTTCCCTGGCTGAATATGCTCTGGCGAACGAAGCACCACGCAAAAACGTGTCCGGTCGTCAGGAATATCT
GAAAGCAACATTGAATCAATACATTTTGGCTGATTAA

Protein sequence :
MAYFEQVSKINFEGKQSDNPFAFKFYNPQEIVAGKTMEEHLRFSMAYWHTLVAGGSDPFGVETAERPWSKFTGLDLAKAR
VEAAFELLDKLNLPYFAFHDVDIAPEGASLKEFYSNLDTIVDLIEEHMKATGKKLLWNTANMFSHPRYLHGAATTCNADV
YAHAAAQIKKGLEVGKRLGADNYVFWGGREGYETLLNTDLKLEQDNLGRMFHMAVDYAREIGFDAQFLIEPKPKEPTKHQ
YDFDAATTIAFLQKYDLDQHFKLNLEANHATLAGHTFDHEVRVARVNGMLGSLDANQGDLLLGWDTDEFPVDLYDATLTM
YEVLQNEGLGRGGINFDAKVRRASFEPEDLFLAHIAGMDTYAKGLKVAAKLIEDRVFEDFIEKRYSSFKEGIGADIVSGK
ATLASLAEYALANEAPRKNVSGRQEYLKATLNQYILAD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
xylA NP_814326.1 xylose isomerase Not tested Not named Protein 6e-142 66
ef0082 AAM75286.1 EF0082 Not tested Not named Protein 5e-142 66