Gene Information

Name : lspA (PPM_3336)
Accession : YP_008048900.1
Strain : Paenibacillus polymyxa M1
Genome accession: NC_017542
Putative virulence/resistance : Virulence
Product : signal peptidase II
Function : -
COG functional category : -
COG ID : -
EC number : 3.4.23.36
Position : 3869288 - 3869779 bp
Length : 492 bp
Strand : -
Note : -

DNA sequence :
GTGATTTATTTTGGTATTGCGCTAATTATTTTTTTGATTGATCAGGGAGTCAAATATTTGGTGGCTACGCGGATGGAATT
GTACGAGCAAATACCAGTCATCGGCAATTTCTTTTTAATTACCTCCCATCGTAATCGCGGAGCCGCTTTTGGGATTTTGG
AAGGGCAACGCTGGCTTTTTATCGTGATCACAATTGTAGTAGTGATCGGTATCGTATGGTACCTAAGAAAAACAGTCAGA
GCTGGGCAAAAACTACTTCCTGTTGCGCTAAGTTTGGTGCTTGGGGGAGCGGTTGGTAATTTTTTGGATCGGGCTATTTC
TGGAGAAGTGGTTGATTTTGCACAGTTCAATTTTGGAAGCTACACATTCCCGATTTTTAATGTGGCAGATTCGGCAATTG
TCATCGGTGTTGCACTGATTATTTTGGATACATTGCTGGAATCGCGTCGGGAAAAAGGGAATGGCAATGATAGCGTTGAA
GGGAAGTCATAG

Protein sequence :
MIYFGIALIIFLIDQGVKYLVATRMELYEQIPVIGNFFLITSHRNRGAAFGILEGQRWLFIVITIVVVIGIVWYLRKTVR
AGQKLLPVALSLVLGGAVGNFLDRAISGEVVDFAQFNFGSYTFPIFNVADSAIVIGVALIILDTLLESRREKGNGNDSVE
GKS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SE0072 NP_763627.1 lipoprotein signal peptidase Not tested SCCpbp4 Protein 8e-14 54

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
lspA YP_008048900.1 signal peptidase II VFG2161 Protein 1e-21 44