Gene Information

Name : arsB1 (PPM_3096)
Accession : YP_005960740.1
Strain : Paenibacillus polymyxa M1
Genome accession: NC_017542
Putative virulence/resistance : Resistance
Product : arsenical pump membrane protein Arsenic efflux pump protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3569581 - 3570870 bp
Length : 1290 bp
Strand : -
Note : -

DNA sequence : 
TTGGTTTGGTTGGCATGCATTATATTTTTAGCCACTTTAGTGTTGGTGATCTGGCAGCCTAAAAATTTGTCTATTGGCTG
GTCTGCCTGCGGAGGAGCTGTACTTGCTCTACTGGTAGGTGTCGTCGATTTGCATGATGTTTGGGAAGTGACTCAAATTG
TCTGGAATGCAACCCTGGCTTTTGTGGCCATCATTCTGATTTCGTTGGTGCTTGATAAAATCGGATTTTTCGAATGGGCG
GCGCTTCACATGGCACGAGCTGCACGGGGAAGCGGAACTCGGATGTTCGTGTATGTGACCATTCTTGGAGCTGTTGTCGC
TGCTTTTTTTGCGAATGATGGTGCGGCCTTAATTCTGACACCCATTGTTCTAGCGATGGTTCGAGCACTTAAACTGGATG
AGAAAATGGTTTTTCCGTTCATCATAGCGAGTGGTTTTATTGCAGATACGACTTCGCTTCCGCTTGTGGTCAGCAACCTG
GTGAACATTGTATCAGCCGATTTTTTTGGCATCACGTTTATGGAATATGCGGGTCGTATGGTTGTACCTAATTTATTTTC
CTTATTGGCTAGTATTGTAGTTCTGTATCTCTTTTTCCGCAAAAGGATTCCAAAAACGTTTGATGATGCACAATTAATGG
CACCTACAGAAGCGATTAAAGATCCAAAAATGTTCCTTATGTCCTGGATTGTTCTTGTGGTGCTGTTGATTGGCTACTTT
GCATGCGAATTTTTTAGTATTCCTGTCTCAGTCGTAGCCGGTATCATAGCCATCTTTTTCTTGCTGCTGGCGAGAAAAAG
TCCTGCGGTACCGTTGAAAGAAGTCATCAAGGGTGCTCCATGGGCTATCGTATTTTTCTCTATCGGCATGTATGTAGTGG
TGTATGGTCTGCGTAATGCCGGTTTGACGGATCTTCTGGCTCATGTGATTCAAGCAGCTGCCGATCAAGGTATGTTTGTA
GGCACCATGGGCATGGGTTTTATCGCGGCGGTTATCTCATCGTTGATGAATAACATGCCTACAGTCATGATTGATGCGCT
TGCCATTAATGCCACCCATACGACTGGAATGGTCAAAGAAGCACTGATTTACGCTAATGTAATTGGATCGGATTTGGGTC
CGAAAATAACCCCGATTGGTTCATTGGCCACATTGCTATGGCTACATGTGCTTAGCTCTAAAGGTGTGAAAATTTCTTGG
GGAACTTATTTTAAAACAGGCATTGTTTTAACGATCCCTACTCTTTTTATTACGCTATTAGGCCTGTATCTGTGGTTAGT
CATTTCATAA

Protein sequence : 
MVWLACIIFLATLVLVIWQPKNLSIGWSACGGAVLALLVGVVDLHDVWEVTQIVWNATLAFVAIILISLVLDKIGFFEWA
ALHMARAARGSGTRMFVYVTILGAVVAAFFANDGAALILTPIVLAMVRALKLDEKMVFPFIIASGFIADTTSLPLVVSNL
VNIVSADFFGITFMEYAGRMVVPNLFSLLASIVVLYLFFRKRIPKTFDDAQLMAPTEAIKDPKMFLMSWIVLVVLLIGYF
ACEFFSIPVSVVAGIIAIFFLLLARKSPAVPLKEVIKGAPWAIVFFSIGMYVVVYGLRNAGLTDLLAHVIQAAADQGMFV
GTMGMGFIAAVISSLMNNMPTVMIDALAINATHTTGMVKEALIYANVIGSDLGPKITPIGSLATLLWLHVLSSKGVKISW
GTYFKTGIVLTIPTLFITLLGLYLWLVIS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
arsB YP_252017.1 arsenical pump membrane protein Not tested SCCmec Protein 9e-134 70
SH0109 YP_252024.1 arsenical pump membrane protein Not tested SCCmec Protein 4e-136 69
arsB YP_005754065.1 arsenical pump membrane protein Not tested Type-XI SCCmec Protein 3e-129 68
arsB2 YP_001007633.1 arsenical pump membrane protein Not tested YAPI Protein 1e-107 59

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
arsB1 YP_005960740.1 arsenical pump membrane protein Arsenic efflux pump protein BAC0574 Protein 5e-133 69
arsB1 YP_005960740.1 arsenical pump membrane protein Arsenic efflux pump protein BAC0575 Protein 9e-137 68
arsB1 YP_005960740.1 arsenical pump membrane protein Arsenic efflux pump protein BAC0576 Protein 6e-106 59
arsB1 YP_005960740.1 arsenical pump membrane protein Arsenic efflux pump protein BAC0578 Protein 9e-107 59
arsB1 YP_005960740.1 arsenical pump membrane protein Arsenic efflux pump protein BAC0031 Protein 1e-103 58
arsB1 YP_005960740.1 arsenical pump membrane protein Arsenic efflux pump protein BAC0577 Protein 3e-104 57