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Name : pdhD (PPM_2595) Accession : YP_005960239.1 Strain : Paenibacillus polymyxa M1 Genome accession: NC_017542 Putative virulence/resistance : Unknown Product : pyruvate dehydrogenase complex E3 component,dihydrolipoamide dehydrogenase Function : - COG functional category : - COG ID : - EC number : 1.8.1.4 Position : 3069293 - 3070714 bp Length : 1422 bp Strand : - Note : - DNA sequence : ATGGTAGTAGGAGACGCTTCTCTGGATATTGACACATTGGTTATCGGTGCGGGTCCTGGCGGCTATGTAGCTGCCATCCG TGCCGCACAATTGGGACAAAGCGTATTGATCGTTGACAAATCTGAGCTGGGCGGTGTCTGCTTGAATCGTGGATGTATTC CATCCAAAGCTTTGATCTCTGCAGCTCATCAATACGAAGCAGCTAAACATGGCGAAACTTTCGGTATTACGGCTGAAAAT GTAAAAGTAGATTTTGCAAAAACACAAGAATTCAAAAACGGTGTTGTTAAGAAAATGACTGGCGGCGTAAGCGGCTTGCT CAAAGGCAACAAAGTCGAAGTTTTCAACGGTGAGTGCATGTTCATCAACGAAAACGAAGCGCGTGTATTCAACGAACATG AATCACCACGTTACCGTTTTAAAAATGCAATTATCGCAACAGGCTCCCGTCCTATCGAATTGAAGCCATTCCCGTTTGGC GGACGCATTCTGTCTTCTACTGAAGCATTGAACCTGCCTGAAATTCCGAAAAGCCTGATCGTTATCGGTGGTGGATATAT TGGTGCAGAGCTTGGACAAATGTATTCCAAATTCGGTTCCAAAGTAACGATCATTGAAGGTATGGATACTGTTCTTCCTG GCTTCGATAAAGATATGACTTCCATCGTTTCGAAAAGCATGAAGAAAACAGGTATCGAAATCTTCACTGGCGCTAAAGCG GAAAGTGCGGAACAAACTGATAAAGATGTAACAGTGAAATTCTCTGTTAACGGTGAAAGCAAAGAAGTAACTGCTGAGTA CCTGCTTGTAACTGTTGGACGTCGTCCAAATACAGACGGTGAACTGGGTCTGGATTTGATCGGTGTAGAACTGGATGAAC GCGGAATGGTGAAAGTTGACCACCAAGGACGCACAAGCATCCCTCACATCTTCGCAATCGGCGATATTGTTCCTGGTCTT GCTCTGGCTCACAAAGCTTCTTACGAAGGTAAAGTAGCTGCTGAAGTAATTGCTGGCCAACCATCTGTTGTAGACTATAA ATGTATTCCGGCTGTTGTGTTCACAGATCCAGAATGCTCTAGCGTAGGCTACACAGAGACACAAGCTAAAGAAAAAGGCT ATAATGTCAAAGTTGGCAAGTTCTCTTATGGAGCAAACGGTCGTGCCGTTTCCCTGAACGCTGCTGAAGGCTTTGTAAAA ATCGTAGCTGACGCAGATACAGGTCTGGTACTGGGTACGCAAATCGTAGGTCTGGAAGCTTCCAACCTGATTGCTGAGCT GGGTCTGGCGATTGAAATGGGTGCTACACTCGAAGATATCTCCTTGACTATCCATGCTCACCCTACACTGGGCGAACTTG TGATGGAAGCTGCAGAAGTCGTAATGGGTCATCCGATCCACGCATTGGCGCCACGTCGCTAA Protein sequence : MVVGDASLDIDTLVIGAGPGGYVAAIRAAQLGQSVLIVDKSELGGVCLNRGCIPSKALISAAHQYEAAKHGETFGITAEN VKVDFAKTQEFKNGVVKKMTGGVSGLLKGNKVEVFNGECMFINENEARVFNEHESPRYRFKNAIIATGSRPIELKPFPFG GRILSSTEALNLPEIPKSLIVIGGGYIGAELGQMYSKFGSKVTIIEGMDTVLPGFDKDMTSIVSKSMKKTGIEIFTGAKA ESAEQTDKDVTVKFSVNGESKEVTAEYLLVTVGRRPNTDGELGLDLIGVELDERGMVKVDHQGRTSIPHIFAIGDIVPGL ALAHKASYEGKVAAEVIAGQPSVVDYKCIPAVVFTDPECSSVGYTETQAKEKGYNVKVGKFSYGANGRAVSLNAAEGFVK IVADADTGLVLGTQIVGLEASNLIAELGLAIEMGATLEDISLTIHAHPTLGELVMEAAEVVMGHPIHALAPRR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SE0077 | NP_763632.1 | dihydrolipoamide dehydrogenase component of pyruvate dehydrogenase E3 | Not tested | SCCpbp4 | Protein | 4e-112 | 53 |
