Gene Information

Name : katA (PPM_2500)
Accession : YP_005960144.1
Strain : Paenibacillus polymyxa M1
Genome accession: NC_017542
Putative virulence/resistance : Unknown
Product : catalase
Function : -
COG functional category : -
COG ID : -
EC number : 1.11.1.6
Position : 2952380 - 2953837 bp
Length : 1458 bp
Strand : -
Note : -

DNA sequence :
ATGAGTAACCAACCAACGAACCTGACTACAAGCTGGGGCGCTCCTGTTGGAGATAATCAGAATTCGATTACAGCAGGCTC
ACGTGGTCCCACATTAATTCAGGATGTGCATCTGCTGGAGAAACTGGCGCATTTTAACCGGGAGCGTGTGCCGGAACGCG
TTGTTCATGCTAAAGGTGCGGGGGCGCACGGATATTTTGAAGTCACTAATGATTTGTCTTCATATACAAAAGCAAGTTTC
TTGTCCGAAGTGGGCAAGCGTACACCGATGTTTATCCGTTTTTCTACTGTGGCAGGTGAGTTAGGCTCGTCCGATACTGT
ACGTGATCCACGTGGATTTGCGGTAAAGTTTTATACAGAAGAAGGAAACTATGATCTCGTGGGCAATAATACACCTGTCT
TTTTTATTCGGGATGCTATTAAATTTCCTGACTTTATTCATACGCAAAAACGTCATCCCCAAACGCATTTAAAAAACCCG
AATGCGGTCTGGGATTTCTGGTCCCTATCTCCTGAATCACTGCATCAGGTAAGTATCCTGATGTCTGACCGCGGTATTCC
CGCTACACTTAGACATATGCATGGTTTTGGCAGCCATACATTCAAGTGGGTAAACGCACAGGGACAGGCCGTATGGGTGA
AATATCATTTTAAAACAGAACAAGGTATACAAAATCTTGATGTGGATTTAGCTGCGAAAATTGCCGGTGAAAACCCGGAT
TATCATATACAAGATTTGTTTAATGCGATTAAAAGGGGCGATTTCCCGGCATGGAAACTTTATGTGCAGATTATGCCTAT
AGAAGATGCGGATACGTACCGTTTTGATCCATTCGATGTGACCAAAGTATGGTCTCAAAAGGATTACCCGCTGATCGAGG
TAGGACGCATGGTGCTGAATCGCAATCCTGAGAACTACTTTGCTGAGGTAGAGCAGGCGACATTCTCACCCGGTTCATTT
GTTCCTGGTATTGAGGCATCCCCGGATAAGATGCTGCAAGGACGCTTGTTTGCCTATGGTGACGCACATCGCTATCGTGT
AGGCGCAAACCATAATGCGTTGCCCATCAATCGGCCGCATGCGGAAGTACACAACTACCAACGCGATGGTGCATTGCGCA
GTGACAGTAATGGCGGGGGATCTGTCTATTATGAGCCTAATAGTCTCGGTGGACCGAAAGAATCACCAGCTCACAAAATT
GCTCCTTTTGAAGTGTCTGGTGAGGCACAAAGTGTAGCCTATGATCATCACGATCACTACACACAACCAGGGGACCTGTA
CCGCTTGCTCAGTGAAGAGGAGCGCTCACGCCTGGTCCGAAACATCGTAAATGCGATGAAGCCTGTAGAAAGTGATGAAA
TCAAACTGCGTCAGATCGGTCATTTCTATAAAGCTGATCCTGAATACGGACGTCGTGTAGCGGATGGTCTGGGCTTGACC
GTTCCACAAGGCGAGTAG

Protein sequence :
MSNQPTNLTTSWGAPVGDNQNSITAGSRGPTLIQDVHLLEKLAHFNRERVPERVVHAKGAGAHGYFEVTNDLSSYTKASF
LSEVGKRTPMFIRFSTVAGELGSSDTVRDPRGFAVKFYTEEGNYDLVGNNTPVFFIRDAIKFPDFIHTQKRHPQTHLKNP
NAVWDFWSLSPESLHQVSILMSDRGIPATLRHMHGFGSHTFKWVNAQGQAVWVKYHFKTEQGIQNLDVDLAAKIAGENPD
YHIQDLFNAIKRGDFPAWKLYVQIMPIEDADTYRFDPFDVTKVWSQKDYPLIEVGRMVLNRNPENYFAEVEQATFSPGSF
VPGIEASPDKMLQGRLFAYGDAHRYRVGANHNALPINRPHAEVHNYQRDGALRSDSNGGGSVYYEPNSLGGPKESPAHKI
APFEVSGEAQSVAYDHHDHYTQPGDLYRLLSEEERSRLVRNIVNAMKPVESDEIKLRQIGHFYKADPEYGRRVADGLGLT
VPQGE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
katA ABD94664.1 catalase isozyme A Not tested ExoU island A Protein 2e-124 55
katA YP_005126717.1 catalase Not tested Not named Protein 3e-110 52
katA YP_005680448.1 catalase Not tested PiCp 3 Protein 6e-106 51
katA YP_005682539.1 catalase Not tested PiCp 3 Protein 6e-106 51
katA YP_003782575.1 catalase Not tested PiCp 3 Protein 6e-106 51
katA YP_005684630.1 catalase Not tested PiCp 3 Protein 6e-106 51