Gene Information

Name : fecD5 (PPM_2137)
Accession : YP_005959781.1
Strain : Paenibacillus polymyxa M1
Genome accession: NC_017542
Putative virulence/resistance : Virulence
Product : Vitamin B12 import system permease protein btuC
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2458784 - 2459896 bp
Length : 1113 bp
Strand : +
Note : -

DNA sequence : 
ATGATTTCGAGAACAAGCAGCGATTATTCATCCAAGGCTAATTCTCGAGCTGATCTAGCAGGGAAGCCTCCATGGAGATT
TACAACAATTCTGCTGCTGTTAACTGCTGGGCTTGTGCTGTCAGTTACACTCGCAGTCATGCTGGGGCCTGTGGCTGTCG
CTCCAGGGACAGTATGGCGAATTGCGCTGTCCCACTTGCCCTGGCTGGATCAGTGGGTACCCATGACATGGACCAAACCG
GAGCAATATATCGTCTGGGAAATTCGCTTTCCGCGTGTGCTGCTAGGTGTTGTCGTGGGAGCAGGGCTTGCTGTTACCGG
AGCGGCTATACAGGCATTAATTCGCAATTCGTTAGCGGACCCCTATATTCTAGGAGTCTCGTCGGGGGCTTCAGTGACAG
CGACGTTAGTTATTGTGTTTGGAGCTTTTGGATTTTTGGGACGACTTGCACTGCCCCTATCTGCTTTTATAGGCTCCTTA
GCTGCAATGCTCATGGTGTTCGCGTTGGCTCGTGTGGCCGGGCGTATATCGACGACCCGCTTGCTGTTGGCAGGGGTAGC
GGTATCTATGATGCTGTCGGCTGTGACTAGCTTTATCGTTACGATGGCCCCGAATGAAAAAGGCATCCGTGACGCGATGT
ATTGGATGATGGGAAGTCTGGCAGGCGCTCAATGGGATACGCTTTTTATTCCAAGCCTCATTATAACCGTTGGAACGGCC
GTCCTTTTAACCCGATACCGTTCACTGAATGCTTTGCTAACGGGGGAAGAAGCCGCCGTAACGCTCGGTGTGAACGTGCA
GGCGTTCCGTGTATTATTGGTTGTTGTCGCTTCCCTTTTAACCGGGGCAGTCGTATCAGTTAGTGGCTCAATTGGCTTTG
TCGGGCTTATGATTCCACACATCGTTAGGCTAATAGTGGGATCGGATCATCGACGTGTCCTGCCTGTCAGCCTGCTTCTG
GGAGCTATCTTTGTCGTGTGGGCAGACGTATGTGCTCGGCTCGTGCTTGCTCCGCAGGAACTGCCGATTGGTATTGTAAC
GGCTGTATGCGGTGGACCCTTTTTTGTATGGCTGCTGCGGCGCAGCTCCTACTCGTTTGGAGGCGAAAAATGA

Protein sequence : 
MISRTSSDYSSKANSRADLAGKPPWRFTTILLLLTAGLVLSVTLAVMLGPVAVAPGTVWRIALSHLPWLDQWVPMTWTKP
EQYIVWEIRFPRVLLGVVVGAGLAVTGAAIQALIRNSLADPYILGVSSGASVTATLVIVFGAFGFLGRLALPLSAFIGSL
AAMLMVFALARVAGRISTTRLLLAGVAVSMMLSAVTSFIVTMAPNEKGIRDAMYWMMGSLAGAQWDTLFIPSLIITVGTA
VLLTRYRSLNALLTGEEAAVTLGVNVQAFRVLLVVVASLLTGAVVSVSGSIGFVGLMIPHIVRLIVGSDHRRVLPVSLLL
GAIFVVWADVCARLVLAPQELPIGIVTAVCGGPFFVWLLRRSSYSFGGEK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CpC231_1907 YP_005684260.1 Iron(III) dicitrate transport system permease fecD Virulence PiCp 7 Protein 1e-29 45
cpfrc_01919 YP_003784319.1 hypothetical protein Not tested PiCp 7 Protein 1e-29 45
Cp1002_1913 YP_005682168.1 Iron(III) dicitrate transport system permease fecD Virulence PiCp 7 Protein 1e-29 45
CpI19_1928 YP_005686352.1 Iron(III) dicitrate transport system permease fecD Virulence PiCp 7 Protein 3e-29 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fecD5 YP_005959781.1 Vitamin B12 import system permease protein btuC VFG0922 Protein 7e-23 43