Gene Information

Name : tnpA1 (PPM_2097)
Accession : YP_005959741.1
Strain : Paenibacillus polymyxa M1
Genome accession: NC_017542
Putative virulence/resistance : Unknown
Product : transposase for insertion sequence element IS1001
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2394292 - 2395467 bp
Length : 1176 bp
Strand : -
Note : -

DNA sequence :
ATGGACTTGCCTATTCACGGCAAGCGTGTAGGCCTTCTTATCAAGCGTCAGAGGTATCGCTGTAGAGACTGCAATCGAAC
CTTTTGGGAACACTTAAACCACACCATAGACGAAAAGCGAAACTGCACCAAACGATTATTGTCTTATATAGAGAAGCAAA
GCCTTAAACGCACATTTGTCAGCATATCCGAGGATGTTGGATTGCATGAAAAAACGATACGTAACATCTTTCGTGATTAC
ATTAATCGTCTTAAAGAAACGCTTCGATTTGAAACTCCTAATTGGCTTGGGATTGACGAAATACACATTATTAAGCCAAG
ATGCGTTTTAACCAACATTGAGGAACATACTTTGTTAGACGTTTTGCCCAATCGTAACAAGGAAACCGTTGTAGGCTACC
TCTCACGCCTTCCAAATCGAGGACAAATACGATACGTCACAATGGATATGTGGCAGCCATATAAGGACGCCGTGAGGGCT
ATATTGCCAAAAGCTCTTATCATCGTCGATAAGTTTCACGTTGTCCGTATGGCAAACCAAGCGTTAGAAACCATTCGTAA
GCAGCTCCGAGACGGATTATCGCCAAGAGAGCGCCGCGGGCTGATGCACGACCGTTTTATCCTCCTAAAACGCCGTATAG
AGCTTACAGAGATGGATAAGATTACGCTTGACCTTTGGACAAAAAATCATCCTTCTCTCGGCACTGCTTATGACTTAAAG
GAATCATATTTCGATATTTGGGAATGTGATAGCAGACAGACGGCATTCCTTAAATACCACGAATGGAAAGTTAAAATACC
AACTGAACTGCAATCCGCTTTTGAACCACTTACAAAGGCTATGAAGAACTGGGAACAGGAAATATTCGCCTACTTCGACC
ATCGCATTACAAACGCTTATACGGAATCTCTAAACAGCCTTGTTCGAGTCATTAATCGTTTAGGCAGGGGATACTCTTTT
GAAGCCCTACGAGCCAAGATACTCTTTACAGAGGGACTTAAAAAGCAACGTAAGCCTAAGTACCAGAGGCGGTTTGATAG
CTACGATCTACAGGAGGAAAACTTCCCGATGCTTAATATGCCACCTGTTGGAGTTGTTCGTGAGCCAGAAGAAATAATCT
TGCTGGGAATCGATTTTTCCACCTTGATCGAGAAATTGGAGAAGGATCAGCTATAA

Protein sequence :
MDLPIHGKRVGLLIKRQRYRCRDCNRTFWEHLNHTIDEKRNCTKRLLSYIEKQSLKRTFVSISEDVGLHEKTIRNIFRDY
INRLKETLRFETPNWLGIDEIHIIKPRCVLTNIEEHTLLDVLPNRNKETVVGYLSRLPNRGQIRYVTMDMWQPYKDAVRA
ILPKALIIVDKFHVVRMANQALETIRKQLRDGLSPRERRGLMHDRFILLKRRIELTEMDKITLDLWTKNHPSLGTAYDLK
ESYFDIWECDSRQTAFLKYHEWKVKIPTELQSAFEPLTKAMKNWEQEIFAYFDHRITNAYTESLNSLVRVINRLGRGYSF
EALRAKILFTEGLKKQRKPKYQRRFDSYDLQEENFPMLNMPPVGVVREPEEIILLGIDFSTLIEKLEKDQL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Pmu_03510 YP_005176249.1 transposase tnpA Not tested ICEPmu1 Protein 5e-111 56
1_386 CAJ77097.1 Transposase Not tested AbaR1 Protein 8e-73 45
tpnA ADI24144.1 transposase Not tested AbaR1 Protein 8e-73 45
tpnA ADZ05772.1 transposase Not tested AbaR11 Protein 8e-73 45
tnpA AGK36656.1 transposase of ISL3 family Not tested AbaR26 Protein 7e-73 45
tnpA ACN81032.1 transposase of ISL3 family Not tested AbaR5 Protein 1e-72 45
tnpA ACS32044.1 transposase of ISL3 family Not tested AbaR5 Protein 1e-72 45
1_52 CAJ77024.1 Transposase Not tested AbaR1 Protein 8e-73 45