Gene Information

Name : rplS (PPM_1860)
Accession : YP_005959504.1
Strain : Paenibacillus polymyxa M1
Genome accession: NC_017542
Putative virulence/resistance : Unknown
Product : 50S ribosomal protein L19
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2142324 - 2142668 bp
Length : 345 bp
Strand : +
Note : -

DNA sequence :
ATGAATATCGTCCAAGCGATTACTGAAGAACAACTGCGTAAAGATCTGCCTAACTTTCGTCCTGGTGACACTTTGAAAGT
GCACGTGAAGGTTATCGAGGGAACTCGTGAGCGTATCCAGTTGTTTGAAGGTGTAGTAATTAAACGCCGTGGTGGTGGAA
TCAGTGAGACTTTTACAGTTCGTAAAATTTCTTACGGTGTAGGTGTGGAAAGAACTTTCCCGCTTCATTCCCCAAAAATC
GATAAAATCGAAGTGGCTCGCCGTGGTAAAGTGCGTCGTGCGAAGCTTTATTATCTTCGTGAACTGCGCGGTAAAGCAGC
GAGAATTAAAGAAATTCGTCGTTAA

Protein sequence :
MNIVQAITEEQLRKDLPNFRPGDTLKVHVKVIEGTRERIQLFEGVVIKRRGGGISETFTVRKISYGVGVERTFPLHSPKI
DKIEVARRGKVRRAKLYYLRELRGKAARIKEIRR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rplS CAA68924.1 ribosomal protein L19 Not tested Internalin Protein 5e-40 79
rplS AAS66827.1 50S ribosomal subunit protein Not tested SSR-1 Protein 1e-27 61