Gene Information

Name : metC3 (PPM_1377)
Accession : YP_005959021.1
Strain : Paenibacillus polymyxa M1
Genome accession: NC_017542
Putative virulence/resistance : Unknown
Product : cystathionine beta-lyase
Function : -
COG functional category : -
COG ID : -
EC number : 4.4.1.8
Position : 1648114 - 1649292 bp
Length : 1179 bp
Strand : +
Note : -

DNA sequence :
ATGATAGAGGATGCGAGGAAGATCGGAGAGGATCTGGACAAAGGGCGGAAATTCGCAACCAAGCTGCTGCATTTTGGCTC
TGAAATTGACAGTGTTACAGGGGCATCGAGTGTCCCGATCTATCAAGCTTCGACCTTTCACCATCATGATATTTTTAATC
CTCCGCAGCATGATTATAGCCGTTCAGGTAATCCGACACGACAAGCTTTAGAAGATTATATCGCATTATTAGAAGGCGGA
GCTTGCGGTTTTGCCTTTGCCTCTGGTATGGCTGCTATCTCCACTACATTTATGCTCTTATCGGCTGGTGATCATGTCAT
TGTTTCGGAGGACGTATATGGAGGAACATATCGACTGCTGACCTCCATCTTGAAACGGATGAATATCGAAACGACCTTCG
TTGATATGACGGATCTCAACCTTGTGAAAGAGGCGTTGCAGGAGAATACAAGGGCTGTGTATATGGAAACCCCCTCTAAT
CCGACACTCAAAATTACCGATGTGGCAGGAATAACCTCTTGGGCAAGAGATAATGGGCTGTTGACGTTATTGGATAATAC
TTTTATGACACCTTATTATCAACGTCCGATTGAGCAGGGAGTCGATATTGTATTGCACAGTGCGACCAAGTTTTTAGGTG
GACACAGTGATGTACTGGCAGGACTTGCGGTAGCTCGTACTGAATCATTGGGGAGACAAATCAAGCAGCTGCAGAATGGA
TTGGGTACCGTGCTGGCTCCGCAAGAGTCTTGGTTGCTTATGCGTGGGATGAAGACACTGGAAGCGCGTATGGCTCACAG
CGAAAAAAGTGCAGCTAAGCTTGCAAACTGGCTAAACGAGCGCAATGACATTGAAGCGGTATACTATCCGGGTTTGGAGA
ACCATCCAGGGCGTGCAGTTCATGAGAGTCAATCGAGCGGTTATGGTGCAGTGATATCGTTTGATGTGGGTTCTGGTGAG
CGTGCAAAAGAGGTCCTCAGTCGTGTACGTATTCCCATTGTGGCGGTGAGTCTGGGAGCTGTGGAAAGTATCTTGTCGTA
CCCAGCAATGATGTCACATGCGGCTATGCCGCAAAGTGTACGGTTGGAGCGCAGGATTACGGACGGTCTACTCCGTTTTT
CCGTAGGTCTGGAGGACATTGATGACCTGATCCGTGATCTGGATGAGGCGTTGCGCTAG

Protein sequence :
MIEDARKIGEDLDKGRKFATKLLHFGSEIDSVTGASSVPIYQASTFHHHDIFNPPQHDYSRSGNPTRQALEDYIALLEGG
ACGFAFASGMAAISTTFMLLSAGDHVIVSEDVYGGTYRLLTSILKRMNIETTFVDMTDLNLVKEALQENTRAVYMETPSN
PTLKITDVAGITSWARDNGLLTLLDNTFMTPYYQRPIEQGVDIVLHSATKFLGGHSDVLAGLAVARTESLGRQIKQLQNG
LGTVLAPQESWLLMRGMKTLEARMAHSEKSAAKLANWLNERNDIEAVYYPGLENHPGRAVHESQSSGYGAVISFDVGSGE
RAKEVLSRVRIPIVAVSLGAVESILSYPAMMSHAAMPQSVRLERRITDGLLRFSVGLEDIDDLIRDLDEALR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
metB YP_281510.1 cystathionine beta-lyase Not tested Not named Protein 4e-83 51
SAR0460 YP_039909.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 8e-79 47
SAS0418 YP_042545.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 4e-80 47