Gene Information

Name : metC1 (PPM_1376)
Accession : YP_005959020.1
Strain : Paenibacillus polymyxa M1
Genome accession: NC_017542
Putative virulence/resistance : Resistance
Product : cystathionine beta-lyase
Function : -
COG functional category : -
COG ID : -
EC number : 4.4.1.8
Position : 1646933 - 1648117 bp
Length : 1185 bp
Strand : +
Note : -

DNA sequence : 
ATGAGTGAGAAACAGTGGAAAATCGAAAGCAGATTGGCACAAATTGGTTCGATTGAGGAGCCAGTAACTGGGGCTGTTAA
TTACCCGATTTACCAATCTACGGCGTTCCGCCATCCCCGTCTGGGCCAAAGCACTGGGTTTGATTACATTCGGACGATTA
ATCCCACGCGAAAGGTACTGGAAGAGGCTGCTGCTGCACTTGAATCTGGTGATGCAGGCTTTGCTTGCAGCTCAGGTATG
GCAGCGCTGCAAACTGTATTTGCATTGTTTGGACAGGGAGACCACCTCATTGTATCGCTGGATCTTTATGGCGGGACCTA
TCGTTTGCTAGAGCGTATTTTATCCAAATTTGGTGTGACCGCAAGCTATGTGGATACAAACGATCTTGAAGCACTCCAAC
AGTCATGTCGACCGAATACCAAAGCAGTATTCATAGAAACGCCTACAAACCCGTTAATGATGATAACTGATATTCAAGCG
GTGGCTTCATGGGCATCACAACATGAGTTGCTTACTATTGTAGATAATACACTGCTAACACCATATTTTCAGCGGCCATT
GGAACTGGGTGCGGATATTGTGGTACATAGCGCAACCAAATATTTGGGCGGGCACAACGATGTGCTGGCAGGGTTGATTG
TAACCAAAGGAAAAGAGCTGTCAGCTGAAATTTCCTTCCTGCACAATTCCATAGGGGCCGTGCTTTCCCCTAGCGACTGT
TATCAGTTGATGAAGGGGATGAAGACGTTAGCGCTGCGCATGGATCGACATGAGCATAATGCAACGGTGTTGTCTAATTA
TTTACTGACGCATCCGGCAGTGGCGGAAGTATTTTACCCGGCGCTTGAAGGTCATCCGGGTCGTGAGATACAAAATAAAC
AATCCAGCGGAAACACAGGGATTTTCTCTTTTAAAGTGAAGGATGCTCGCTACGTTGAGCCTTTGCTTCGCCATATTAAG
CTTATTGCGTTTGCCGAAAGTCTGGGCGGTGTGGAATCGCTAATGACTTATCCTGCTGTACAGACACATGCGGATATACC
GGCAGAAATTCGGGATGCAGTCGGGGTAGATGACAGGTTGCTTCGTTTCTCCGTAGGTATCGAGCATACAGATGACCTGA
TTGAAGATTTGCGTTCGGCACTGGAAGCGGCACGTCAAGAAGTAGAAGGAGGGGAACAGCAATGA

Protein sequence : 
MSEKQWKIESRLAQIGSIEEPVTGAVNYPIYQSTAFRHPRLGQSTGFDYIRTINPTRKVLEEAAAALESGDAGFACSSGM
AALQTVFALFGQGDHLIVSLDLYGGTYRLLERILSKFGVTASYVDTNDLEALQQSCRPNTKAVFIETPTNPLMMITDIQA
VASWASQHELLTIVDNTLLTPYFQRPLELGADIVVHSATKYLGGHNDVLAGLIVTKGKELSAEISFLHNSIGAVLSPSDC
YQLMKGMKTLALRMDRHEHNATVLSNYLLTHPAVAEVFYPALEGHPGREIQNKQSSGNTGIFSFKVKDARYVEPLLRHIK
LIAFAESLGGVESLMTYPAVQTHADIPAEIRDAVGVDDRLLRFSVGIEHTDDLIEDLRSALEAARQEVEGGEQQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAR0460 YP_039909.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 1e-88 46
SAS0418 YP_042545.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 1e-89 46

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
metC1 YP_005959020.1 cystathionine beta-lyase BAC0207 Protein 3e-56 42