Gene Information

Name : KPN2242_25496 (KPN2242_25496)
Accession : YP_005957488.1
Strain :
Genome accession: NC_017541
Putative virulence/resistance : Virulence
Product : Transcriptional regulatory protein pcoR
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 68108 - 68788 bp
Length : 681 bp
Strand : +
Note : COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

DNA sequence : 
ATGCAGCGTATTTTAATCGTTGAAGACGAACAAAAAACAGGTCGTTACCTGCAGCAGGGACTGGTTGAGGAAGGCTATCA
GGCCGATCTCTTTAATAATGGCCGCGATGGTCTCGGGGCCGCGTCGAAGGGACAGTATGATTTGATAATACTGGACGTGA
TGCTGCCTTTCCTCGACGGGTGGCAAATCATCAGCGCACTGAGGGAGTCCGGGCACGAAGAACCGGTCCTGTTTTTAACC
GCAAAGGACAACGTGCGGGACAAAGTGAAAGGACTGGAGCTTGGCGCAGATGACTACCTGATTAAGCCCTTTGATTTTAC
GGAGCTGGTTGCACGTGTAAGAACCCTACTGCGCCGGGCACGCTCGCAGGCCGCAACAGTCTGCACCATCGCCGATATGA
CCGTTGATATGGTGCGCCGGACCGTGATCCGTTCGGGGAAGAAGATCCATCTCACCGGTAAAGAATACGTTCTGCTTGAG
TTGCTGCTGCAACGCACCGGAGAAGTGTTACCCAGGAGTCTTATCTCGTCCCTGGTCTGGAACATGAATTTTGACAGTGA
TACGAATGTGATTGATGTCGCCGTGAGACGTCTGAGAAGTAAAATTGATGATGACTTTGAGCCAAAACTGATCCATACCG
TTCGCGGTGCCGGATATGTCCTGGAGATCAGAGAAGAGTGA

Protein sequence : 
MQRILIVEDEQKTGRYLQQGLVEEGYQADLFNNGRDGLGAASKGQYDLIILDVMLPFLDGWQIISALRESGHEEPVLFLT
AKDNVRDKVKGLELGADDYLIKPFDFTELVARVRTLLRRARSQAATVCTIADMTVDMVRRTVIRSGKKIHLTGKEYVLLE
LLLQRTGEVLPRSLISSLVWNMNFDSDTNVIDVAVRRLRSKIDDDFEPKLIHTVRGAGYVLEIREE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 2e-49 55
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 1e-48 54

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
KPN2242_25496 YP_005957488.1 Transcriptional regulatory protein pcoR BAC0308 Protein 1e-95 100
KPN2242_25496 YP_005957488.1 Transcriptional regulatory protein pcoR BAC0638 Protein 1e-55 64
KPN2242_25496 YP_005957488.1 Transcriptional regulatory protein pcoR BAC0197 Protein 9e-60 63
KPN2242_25496 YP_005957488.1 Transcriptional regulatory protein pcoR BAC0083 Protein 4e-59 62
KPN2242_25496 YP_005957488.1 Transcriptional regulatory protein pcoR BAC0111 Protein 6e-57 60
KPN2242_25496 YP_005957488.1 Transcriptional regulatory protein pcoR BAC0125 Protein 6e-55 58
KPN2242_25496 YP_005957488.1 Transcriptional regulatory protein pcoR BAC0347 Protein 1e-49 55
KPN2242_25496 YP_005957488.1 Transcriptional regulatory protein pcoR NC_013450.8614146.p0 Protein 2e-30 44
KPN2242_25496 YP_005957488.1 Transcriptional regulatory protein pcoR NC_002951.3238224.p0 Protein 2e-30 44
KPN2242_25496 YP_005957488.1 Transcriptional regulatory protein pcoR NC_007793.3914065.p0 Protein 2e-30 44
KPN2242_25496 YP_005957488.1 Transcriptional regulatory protein pcoR NC_002758.1121390.p0 Protein 2e-30 44
KPN2242_25496 YP_005957488.1 Transcriptional regulatory protein pcoR NC_010079.5776364.p0 Protein 2e-30 44
KPN2242_25496 YP_005957488.1 Transcriptional regulatory protein pcoR NC_002952.2859858.p0 Protein 2e-30 44
KPN2242_25496 YP_005957488.1 Transcriptional regulatory protein pcoR NC_007622.3794948.p0 Protein 2e-30 44
KPN2242_25496 YP_005957488.1 Transcriptional regulatory protein pcoR NC_003923.1003417.p0 Protein 2e-30 44
KPN2242_25496 YP_005957488.1 Transcriptional regulatory protein pcoR AE015929.1.gene1106. Protein 2e-25 42
KPN2242_25496 YP_005957488.1 Transcriptional regulatory protein pcoR HE999704.1.gene1528. Protein 2e-31 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
KPN2242_25496 YP_005957488.1 Transcriptional regulatory protein pcoR VFG0596 Protein 6e-50 55
KPN2242_25496 YP_005957488.1 Transcriptional regulatory protein pcoR VFG1390 Protein 6e-35 44
KPN2242_25496 YP_005957488.1 Transcriptional regulatory protein pcoR VFG1389 Protein 2e-29 42