Gene Information

Name : KPN2242_25411 (KPN2242_25411)
Accession : YP_005957473.1
Strain :
Genome accession: NC_017541
Putative virulence/resistance : Virulence
Product : DNA-binding transcriptional activator CusR
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 51898 - 52578 bp
Length : 681 bp
Strand : -
Note : COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

DNA sequence :

ATGAAAATATTGATCGTCGAAGACGAAATTAAAACAGGTGAATATCTCAGCAAAGGGCTGACAGAGGCAGGGTTCGTCGT
GGATCACGCTGATAATGGTCTTACCGGATATCATCTCGCCATGACAGCCGAGTATGATTTAGTCATTCTGGATATCATGC
TACCTGATGTGAACGGCTGGGATATCATCCGCATGCTGCGCACTGCCGGAAAGGGTATGCCGGTCTTACTGCTGACGGCC
CTCGGCACGATCGAACACAGGGTCAAAGGACTGGAACTGGGTGCGGACGATTATCTGGTTAAACCCTTTGCGTTTGCCGA
ACTGCTCGCCCGGGTGAGAACCCTTCTGAGGCGGGGAAACACGATGATCACGGAAAGCCAGTTTAGGGTGGCTGATCTCT
CGATGGATCTCGTATCCAGAAAAGTCAGTCGCGCCGGAAACCGCATTGTGCTCACCAGTAAAGAGTTCAGCCTGCTGGAA
TTCTTCATTCGCCATCAGGGCGAGGTTCTTCCCCGCTCCCTGATTGCCTCTCAGGTCTGGGACATGAATTTTGACAGCGA
CACTAACGCGATTGATGTCGCCGTAAAGCGACTCCGCGCTAAAATAGACAACGATTACGGGACAAAGCTGATCCAGACTG
TCCGGGGCGTGGGCTATATACTGGAGGCCCCGGATGCATAG

Protein sequence :

MKILIVEDEIKTGEYLSKGLTEAGFVVDHADNGLTGYHLAMTAEYDLVILDIMLPDVNGWDIIRMLRTAGKGMPVLLLTA
LGTIEHRVKGLELGADDYLVKPFAFAELLARVRTLLRRGNTMITESQFRVADLSMDLVSRKVSRAGNRIVLTSKEFSLLE
FFIRHQGEVLPRSLIASQVWDMNFDSDTNAIDVAVKRLRAKIDNDYGTKLIQTVRGVGYILEAPDA

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
copR	NP_460069.2	transcriptional regulatory protein YedW	Not tested	SPI-5	Protein	2e-55	55
copR	AAC33719.1	regulatory protein CopR	Not tested	SPI-5	Protein	5e-55	54

• Homologs from CARD and BacMet (resistance genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
KPN2242_25411	YP_005957473.1	DNA-binding transcriptional activator CusR	BAC0347	Protein	7e-94	93
KPN2242_25411	YP_005957473.1	DNA-binding transcriptional activator CusR	BAC0111	Protein	5e-94	86
KPN2242_25411	YP_005957473.1	DNA-binding transcriptional activator CusR	BAC0638	Protein	6e-64	62
KPN2242_25411	YP_005957473.1	DNA-binding transcriptional activator CusR	BAC0083	Protein	5e-70	61
KPN2242_25411	YP_005957473.1	DNA-binding transcriptional activator CusR	BAC0197	Protein	3e-65	60
KPN2242_25411	YP_005957473.1	DNA-binding transcriptional activator CusR	BAC0308	Protein	2e-61	58
KPN2242_25411	YP_005957473.1	DNA-binding transcriptional activator CusR	BAC0125	Protein	7e-64	56
KPN2242_25411	YP_005957473.1	DNA-binding transcriptional activator CusR	HE999704.1.gene1202.	Protein	4e-36	41
KPN2242_25411	YP_005957473.1	DNA-binding transcriptional activator CusR	AE000516.2.gene3505.	Protein	1e-26	41

• Homologs from VFDB (virulence genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
KPN2242_25411	YP_005957473.1	DNA-binding transcriptional activator CusR	VFG0596	Protein	6e-56	55
KPN2242_25411	YP_005957473.1	DNA-binding transcriptional activator CusR	VFG1390	Protein	1e-42	43
KPN2242_25411	YP_005957473.1	DNA-binding transcriptional activator CusR	VFG1389	Protein	6e-34	41