Gene Information

Name : KPN2242_25266 (KPN2242_25266)
Accession : YP_005957444.1
Strain :
Genome accession: NC_017541
Putative virulence/resistance : Virulence
Product : IucD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 23807 - 25084 bp
Length : 1278 bp
Strand : -
Note : COG3486 Lysine/ornithine N-monooxygenase

DNA sequence :
ATGACAAACACTGTAGATTTTATTGGCATAGGCATCGGCCCGTTCAACCTGAGCATCGCGGCGCTGTCTCATCAGGCAGA
AGGATTAAGCAGCCGCTTCTTTGACGGCCGCCCGCATTTTGCCTGGCATCCCGGCATGCTGGTGCCGGACTGCCATATGC
AGACCATGTTCCTGAAAGATCTGGTTAGCGCTGTGGCTCCCACAAGCCCGTACAGCTTTGTTAATTATCTGGTGAAGCGC
AAAAAATTCTACCGCTTCCTGACCACCGAACTGTGTACCGTATCCCGCGATGAGTTTTCCGACTACCTGCGCTGGGCCGC
CGAAGGGATGAACAATCTGCATTTCAATCATACCGTTGAGAGTATTGATTTCGACGAGAGACACCAGCGGTTTGTGGTGC
AGACCAGCCAGGGCGAAAGCGTTGCCCGCAATATCTGCCTTGGCATTGGCAAGCAACCGCACCTGCCGCCTTGCGTAAAA
ACGGCGACGCAAACCTGCTTCCACGCCAGTGAAATGAGCCTGCGCCGGCCAGACCTCGGCGGCAAGCGAGTCAGCGTGGT
TGGCGGCGGGCAAAGCGGCGCCGACCTGTTTCTCAATGCGCTACGCGGAGAATGGGGCGACGTTGCAGAGATCAGTTGGG
TCTCGCGCCGCAATAACTTTAACGCGCTGGATGAGGCGGCGTTCGCCAACGAATACTTCACGCCTGAGTACGTTTCAGGC
TTCGTCGGTCTGAATGAACGCGCGCGCCAGAAGATGCTCGACGAGCAGAAAATGACCTCCGACGGCATCACGGCCGACTC
GCTACTGACCATTTATCGCGAGTTGTATCATCGCTTCGAGGTACTGAGGCAACCGCGTAACGCCCGTCTGCTGCCAAGCC
GCTCGGTCACCGGGCTGGAAAGTCGCGGCCAGAGCTGGCAACTGCTGCTGGAGCATCATCTGGATAACGGCTATGACACA
CTGGAAAGCGACGTGGTGATTTTCGCCACCGGATACCGTCCCGCGCTGCCGCAGATTCTTTCACCGCTGATGTCGCGAAT
CGCCATGCGCGATGAGTGCAATTTCAAAGTACGCGACGACTTCACCCTGGAGTGGAACGGCCCGAAAGAGAACAACATCT
TCGCGGTCAACGCCAGTATGCAAACCCATGGCATCGCCGAACCCCAGCTCAGCCTGATGGCATGGAGATCTGCACGTATT
CTTAATCGTGTAATGGGACGTGATTTATTCGATCTCAGTATGCCGCCCGCCCTGATTCAGTGGCGCAGCGGCACCTAG

Protein sequence :
MTNTVDFIGIGIGPFNLSIAALSHQAEGLSSRFFDGRPHFAWHPGMLVPDCHMQTMFLKDLVSAVAPTSPYSFVNYLVKR
KKFYRFLTTELCTVSRDEFSDYLRWAAEGMNNLHFNHTVESIDFDERHQRFVVQTSQGESVARNICLGIGKQPHLPPCVK
TATQTCFHASEMSLRRPDLGGKRVSVVGGGQSGADLFLNALRGEWGDVAEISWVSRRNNFNALDEAAFANEYFTPEYVSG
FVGLNERARQKMLDEQKMTSDGITADSLLTIYRELYHRFEVLRQPRNARLLPSRSVTGLESRGQSWQLLLEHHLDNGYDT
LESDVVIFATGYRPALPQILSPLMSRIAMRDECNFKVRDDFTLEWNGPKENNIFAVNASMQTHGIAEPQLSLMAWRSARI
LNRVMGRDLFDLSMPPALIQWRSGT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iucD NP_839220.1 lysine:N6-hydroxylase Virulence SHI-2 Protein 4e-172 82
iucD NP_709457.1 lysine:N6-hydroxylase Virulence SHI-2 Protein 4e-172 82
iucD YP_002414043.1 L-lysine 6-monooxygenase Virulence Not named Protein 2e-172 82
iucD AAD44749.1 IucD Virulence SHI-2 Protein 3e-172 82
iucD AAK71634.1 IucD Virulence SHI-3 Protein 2e-170 81

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
KPN2242_25266 YP_005957444.1 IucD VFG0618 Protein 2e-172 82
KPN2242_25266 YP_005957444.1 IucD VFG0937 Protein 6e-173 82
KPN2242_25266 YP_005957444.1 IucD VFG1084 Protein 9e-171 81