Gene Information

Name : ribD (KPN2242_04235)
Accession : YP_005953332.1
Strain : Klebsiella pneumoniae KCTC 2242
Genome accession: NC_017540
Putative virulence/resistance : Unknown
Product : bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase
Function : -
COG functional category : -
COG ID : -
EC number : 3.5.4.26
Position : 915337 - 916440 bp
Length : 1104 bp
Strand : +
Note : COG0117 Pyrimidine deaminase

DNA sequence :
ATGCAGGACGAAATGTACATGGCGCGTGCGCTGAAGCTTGCCGCGCGCGGTCGCTTTACTACCCATCCTAACCCTAACGT
CGGCTGCGTCATTGTGAAAGACGGCGAGATCGTCGGCGAGGGGTTTCACTATCGCGCCGGCGAGCCGCATGCTGAAGTGC
ACGCCCTGCGCATGGCTGGCGAAAAGGCGCGCGGCGCCACCGCCTACGTCACTCTTGAGCCCTGCAGCCACCATGGCCGT
ACGCCGCCATGCTGCGATGCGCTGATTGCCGCCGGCGTCAGCCGCGTGGTCGCCGCGATGCAGGATCCGAACCCGCAGGT
GGCGGGGCGCGGTTTGTATCGCCTGCAGCAGTCCGGCATTGAGGTCAGCCATGGGCTGATGATGAACGAAGCGGAAGCGC
TGAATAAGGGCTTTCTGAAGCGGATGCGCACCGGTTTTCCCTGGGTGCAGCTGAAGCTGGGCGCCTCGCTGGACGGCCGC
ACGGCGATGGCCAGCGGCGAAAGCCAGTGGATCACCTCCCCGCAGGCGCGACGCGACGTGCAGCGTCTGCGCGCCCAGAG
CCATGCCATCCTGACCAGCAGCGCCACCGTGCTGGCGGACGATCCGGCGCTGACCGTGCGCTGGCAGGAGCTGAGCGCCG
ATACCCAGGCGCTTTATCCCGAAGAGAATTTGCGCCAGCCGCTGCGCGTCGTCATCGACAGCCAGAACCGCGTCACGCCT
GAGCATCGTATTGTGCAGCAGGCGGGGGAAACGCTGTTTGCCCGCCTGCGCGCCGATGAACGGCAGTGGCCGGAAAGCGC
CCGCACGCTGCTGGTACCGGAGCATAACGGCCATCTCGATCTGGTGCTGCTGATGATGCTGCTTGGCAAACAGCAGATCA
ACAGCGTCTGGGTTGAGGCAGGGGCTACGCTTGCCGGGGCGCTGCTGCAGGCGGGCCTGGTCGACGAGCTTATCGTCTAT
ATTGCGCCTAAACTGTTAGGCAATACGGCGCGTGGATTATGCGCGCTGCCGGGGCTTGAAGAGCTGAGCCAGGCCCCCCA
TTTTAAATTCAATGAGATACGTCAGGTTGGCCCGGATGTCTGCCTGCATTTAACCACTGCGTGA

Protein sequence :
MQDEMYMARALKLAARGRFTTHPNPNVGCVIVKDGEIVGEGFHYRAGEPHAEVHALRMAGEKARGATAYVTLEPCSHHGR
TPPCCDALIAAGVSRVVAAMQDPNPQVAGRGLYRLQQSGIEVSHGLMMNEAEALNKGFLKRMRTGFPWVQLKLGASLDGR
TAMASGESQWITSPQARRDVQRLRAQSHAILTSSATVLADDPALTVRWQELSADTQALYPEENLRQPLRVVIDSQNRVTP
EHRIVQQAGETLFARLRADERQWPESARTLLVPEHNGHLDLVLLMMLLGKQQINSVWVEAGATLAGALLQAGLVDELIVY
IAPKLLGNTARGLCALPGLEELSQAPHFKFNEIRQVGPDVCLHLTTA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB0868_00293 YP_008211619.1 Pyrimidine deaminase Not tested AbaR26 Protein 4e-56 47
BJAB07104_00289 YP_008207754.1 Pyrimidine deaminase Not tested AbaR25 Protein 4e-56 47