Gene Information

Name : KPN2242_17820 (KPN2242_17820)
Accession : YP_005956013.1
Strain : Klebsiella pneumoniae KCTC 2242
Genome accession: NC_017540
Putative virulence/resistance : Resistance
Product : putative helix-turn-helix AraC-type transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3755507 - 3755869 bp
Length : 363 bp
Strand : -
Note : COG2207 AraC-type DNA-binding domain-containing proteins

DNA sequence :
ATGAACACTGGCGCCATCATTCAGGATCTGATCGACTGGATCGACAACCATCTTGATAGCCGTCTGGATATTGACACCGT
TGCCCGACGAGCCGGCTATTCGAAGTGGCACCTGCAGCGGATCTTCAAAGAACATACCGGGCAGCCCCTCGGAGAATATA
TTCGGGCGAAAAAGCTGCAAAAGTCGATCGAACGCTTGGCCCACAGCAACGAGCCGATCCTGAACGTGGCGATTGCCCTC
GGCTTTGACTCCCAGCAGTCCTTCAACCGCAGCTTCAAGCGCCGGTACGGCCAGGCGCCCGGCGTCTGGCGCCGGAGTAT
CAGCCGCTCTGTTGCGCAGACATCTCGTCAGCGATCCGCATGA

Protein sequence :
MNTGAIIQDLIDWIDNHLDSRLDIDTVARRAGYSKWHLQRIFKEHTGQPLGEYIRAKKLQKSIERLAHSNEPILNVAIAL
GFDSQQSFNRSFKRRYGQAPGVWRRSISRSVAQTSRQRSA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
soxS YP_219131.1 DNA-binding transcriptional regulator SoxS Not tested SPI-4 Protein 6e-24 46
tetD AAL08447.1 putative transcriptional regulator TetD Not tested SRL Protein 1e-19 44
tetD AEA34665.1 tetracycline resistance protein D Not tested Not named Protein 1e-19 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
KPN2242_17820 YP_005956013.1 putative helix-turn-helix AraC-type transcriptional regulator CP000647.1.gene4499. Protein 2e-25 48
KPN2242_17820 YP_005956013.1 putative helix-turn-helix AraC-type transcriptional regulator CP000647.1.gene1624. Protein 6e-24 47
KPN2242_17820 YP_005956013.1 putative helix-turn-helix AraC-type transcriptional regulator CP001918.1.gene2033. Protein 7e-24 47
KPN2242_17820 YP_005956013.1 putative helix-turn-helix AraC-type transcriptional regulator BAC0371 Protein 1e-24 46
KPN2242_17820 YP_005956013.1 putative helix-turn-helix AraC-type transcriptional regulator NC_002695.1.914293.p Protein 1e-24 46
KPN2242_17820 YP_005956013.1 putative helix-turn-helix AraC-type transcriptional regulator CP001138.1.gene4488. Protein 2e-24 46
KPN2242_17820 YP_005956013.1 putative helix-turn-helix AraC-type transcriptional regulator CP001138.1.gene1637. Protein 1e-23 46
KPN2242_17820 YP_005956013.1 putative helix-turn-helix AraC-type transcriptional regulator CP000034.1.gene4505. Protein 3e-24 45
KPN2242_17820 YP_005956013.1 putative helix-turn-helix AraC-type transcriptional regulator CP001918.1.gene327.p Protein 1e-24 45
KPN2242_17820 YP_005956013.1 putative helix-turn-helix AraC-type transcriptional regulator BAC0560 Protein 9e-24 44
KPN2242_17820 YP_005956013.1 putative helix-turn-helix AraC-type transcriptional regulator NC_002695.1.917339.p Protein 9e-24 44
KPN2242_17820 YP_005956013.1 putative helix-turn-helix AraC-type transcriptional regulator CP000034.1.gene1596. Protein 8e-24 44
KPN2242_17820 YP_005956013.1 putative helix-turn-helix AraC-type transcriptional regulator NC_010558.1.6276025. Protein 5e-20 44
KPN2242_17820 YP_005956013.1 putative helix-turn-helix AraC-type transcriptional regulator CP001138.1.gene612.p Protein 2e-23 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
KPN2242_17820 YP_005956013.1 putative helix-turn-helix AraC-type transcriptional regulator VFG0585 Protein 2e-24 46
KPN2242_17820 YP_005956013.1 putative helix-turn-helix AraC-type transcriptional regulator VFG1038 Protein 4e-20 44