Gene Information

Name : KPN2242_05280 (KPN2242_05280)
Accession : YP_005953541.1
Strain : Klebsiella pneumoniae KCTC 2242
Genome accession: NC_017540
Putative virulence/resistance : Virulence
Product : lysine decarboxylase CadA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1103953 - 1106100 bp
Length : 2148 bp
Strand : +
Note : COG1982 Arginine/lysine/ornithine decarboxylases

DNA sequence :
ATGAACGTTATTGCAATCATGAATCACATGGGGGTTTACTTCAAAGAAGAACCCATCCGTGAACTGCATCGTGCTCTCGA
ACGCCTGGACTTCCGTATTGTCTACCCGAACGACCGTGACGACTTATTAAAACTTATTGAAAACAACTCTCGTCTGTGCG
GCGTGATCTTCGACTGGGATAAATACAATCTCGAACTGTGCGAAGAAATCAGCAAAATGAACGAGTACATGCCGCTGTAT
GCGTTCGCTAACACCTACTCCACCCTGGACGTTAGCCTGAACGATCTGCGCATGCAGGTTCGCTTCTTCGAATATGCGCT
GGGCGCTGCGGAAGATATCGCGAACAAAATCAAACAGAACACTGACGAATACATCGACACCATTCTGCCGCCGCTGACCA
AAGCGCTGTTCAAATATGTCCGTGAAGGTAAATATACCTTCTGTACCCCAGGCCACATGGGTGGTACCGCGTTCCAGAAA
AGCCCGGTAGGCAGCATCTTCTATGATTTCTTTGGCTCCAACACCATGAAATCCGATATCTCCATTTCGGTTTCTGAACT
GGGTTCCCTGCTGGACCACAGCGGCCCGCACAAAGAAGCGGAAGAGTATATCGCTCGCGTGTTTAACGCAGAACGCAGCT
ACATGGTGACCAACGGTACTTCTACCGCTAACAAAATCGTCGGCATGTACTCCGCGCCGGCCGGCAGCACCGTGCTGATT
GACCGTAACTGCCACAAATCGCTGACTCACCTGATGATGATGAGCGACATTACGCCGATCTACTTCCGTCCGACCCGTAA
CGCCTACGGTATCCTCGGCGGTATTCCGCAGAGCGAATTCCAGCACGCGACTATCGCCAAGCGTGTGAAAGAGACGCCGA
ATGCGACCTGGCCGGTACACGCGGTTATCACCAACTCAACCTATGATGGTCTGCTGTACAACACCGACTTCATCAAGAAA
ACCCTGGATGTGAAATCCATCCACTTTGACTCCGCGTGGGTGCCTTACACCAACTTCTCGCCGATCTATGAAGGCAAATG
CGGGATGAGCGGCGGCCGCGTCGAAGGGAAAGTGATTTATGAAACCCAGTCCACGCACAAACTGCTGGCGGCGTTCTCCC
AGGCGTCGATGATCCACGTGAAAGGCGACGTAAACGAAGAGACCTTCAACGAAGCCTACATGATGCACACCACCACCTCT
CCACACTACGGGATCGTGGCCTCCACCGAAACCGCGGCGGCGATGATGAAGGGGAACGCTGGTAAGCGTCTGATCGACGG
CTCTATTGAACGTTCCATTAAGTTCCGTAAAGAGATCAAACGTCTGAAAGGCGAGTCTGACGGCTGGTTCTTCGACGTCT
GGCAGCCGGAGCATATCGATGGTCCTGAATGCTGGCCGCTGCGTTCCGACAGCGCATGGCACGGTTTCAAAAACATCGAT
AACGAACACATGTACCTCGACCCGATCAAAGTCACGCTGCTGACTCCGGGGATGAAGAAAGACGGCACCATGGATGACTT
CGGTATTCCGGCAAGCATCGTGGCGAAATACCTCGACGAACACGGCATCGTGGTTGAGAAAACCGGTCCGTACAACCTGC
TGTTCCTGTTCAGTATCGGTATCGATAAGACTAAAGCGCTGAGCCTGCTGCGTGCGCTGACCGACTTCAAACGCGCGTTC
GACCTGAACCTGCGGGTGAAAAACATGCTGCCGTCGCTGTACCGTGAAGATCCTGAATTCTATGAAAACATGCGTATTCA
GGACCTCGCGCAGAACATTCACAAACTGATTGAGCATCACAACCTGCCGGATCTGATGTTCCGCGCGTTTGAAGTGCTGC
CATCGATGGTGATGACCCCGTATGCCGCGTTCCAGAAAGAGCTGCACGGTCAGACGGAAGAAGTGTATCTCGAAGAGATG
GTCGGCCGCGTCAACGCCAACATGATCCTGCCGTATCCTCCGGGAGTGCCGCTGGTGATGCCGGGTGAGATGATCACCGA
AGAGAGCCGTCCGGTGCTGGAGTTCCTGCAGATGCTGTGCGAAATCGGCGCCCACTATCCAGGCTTCGAAACCGATATCC
ACGGCGCCTATCGTCAGGCGGATGGTCGTTACACCGTTAAAGTGCTGAAAGAAGAGAATAACAAGTAA

Protein sequence :
MNVIAIMNHMGVYFKEEPIRELHRALERLDFRIVYPNDRDDLLKLIENNSRLCGVIFDWDKYNLELCEEISKMNEYMPLY
AFANTYSTLDVSLNDLRMQVRFFEYALGAAEDIANKIKQNTDEYIDTILPPLTKALFKYVREGKYTFCTPGHMGGTAFQK
SPVGSIFYDFFGSNTMKSDISISVSELGSLLDHSGPHKEAEEYIARVFNAERSYMVTNGTSTANKIVGMYSAPAGSTVLI
DRNCHKSLTHLMMMSDITPIYFRPTRNAYGILGGIPQSEFQHATIAKRVKETPNATWPVHAVITNSTYDGLLYNTDFIKK
TLDVKSIHFDSAWVPYTNFSPIYEGKCGMSGGRVEGKVIYETQSTHKLLAAFSQASMIHVKGDVNEETFNEAYMMHTTTS
PHYGIVASTETAAAMMKGNAGKRLIDGSIERSIKFRKEIKRLKGESDGWFFDVWQPEHIDGPECWPLRSDSAWHGFKNID
NEHMYLDPIKVTLLTPGMKKDGTMDDFGIPASIVAKYLDEHGIVVEKTGPYNLLFLFSIGIDKTKALSLLRALTDFKRAF
DLNLRVKNMLPSLYREDPEFYENMRIQDLAQNIHKLIEHHNLPDLMFRAFEVLPSMVMTPYAAFQKELHGQTEEVYLEEM
VGRVNANMILPYPPGVPLVMPGEMITEESRPVLEFLQMLCEIGAHYPGFETDIHGAYRQADGRYTVKVLKEENNK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cadA NP_756988.1 lysine decarboxylase, inducible Not tested PAI II CFT073 Protein 0.0 95
unnamed CAD66195.1 putative cadaverin decarboxylase Virulence PAI III 536 Protein 0.0 67

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
KPN2242_05280 YP_005953541.1 lysine decarboxylase CadA VFG1670 Protein 0.0 67