Gene Information

Name : OCA4_c33150 (OCA4_c33150)
Accession : YP_005952294.1
Strain : Oligotropha carboxidovorans OM4
Genome accession: NC_017538
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3498751 - 3499461 bp
Length : 711 bp
Strand : +
Note : -

DNA sequence : 
ATGGATACTCTCACCGCTCTCTCACAGCCGGCCACCGCCGGCTCACCCGTCATCTCACTCTCCGGCATCGACCTGTCCCT
CGGACGGGGCGCCGCAAAAGTCCATATCCTCAAGGGAATCGACTTGCACGTCGCGCCCGGTGAAACCGTTGGCCTGATCG
GCCCATCCGGTTCGGGCAAATCGACGCTGCTCATGGTCATGGCCGGGCTGGAGAGGCCCGATGCCGGAGAAGTGGTGGTG
CAGGGCACATCTTTCAACGCCCTCGACGAGGATGGTCTCGCACGGTTTCGTGGCCGCGAGATCGGCATCGTGTTTCAATC
GTTCCATCTGATCCCGACCATGACCGCGCTCGAGAACGTCGCGGTGCCGCTCGAACTTGCAGGCAAGAAAGATGCAGCGG
AGCGTGCCGCGCGCGAGTTGCAGGCGGTCGGCCTCGGCGAGCGGCTTCATCATTATCCCGCCGAACTCTCCGGCGGCGAG
CAGCAGCGCGTGGCGCTTGCACGCGCACTCGCACCCGATCCCGCAATTCTTCTCGCCGATGAGCCGACCGGCAATCTCGA
CGAGGCGACCGGCAAGCAGATTGCCGATCTGCTGTTCGATCTACACAAGGCGCGCGGCACGACGCTGGTGCTGGTGACAC
ACGATGCAACGCTGGCGCAGCGCTGCGGCCGCACCGTGAAACTGCGCTCGGGCCACATCGATGGCGCTTAA

Protein sequence : 
MDTLTALSQPATAGSPVISLSGIDLSLGRGAAKVHILKGIDLHVAPGETVGLIGPSGSGKSTLLMVMAGLERPDAGEVVV
QGTSFNALDEDGLARFRGREIGIVFQSFHLIPTMTALENVAVPLELAGKKDAAERAARELQAVGLGERLHHYPAELSGGE
QQRVALARALAPDPAILLADEPTGNLDEATGKQIADLLFDLHKARGTTLVLVTHDATLAQRCGRTVKLRSGHIDGA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 6e-24 46
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-27 44
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-28 43
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 5e-28 43
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-28 43
unnamed ABA47263.1 ABC transporter Not tested S-PAI Protein 3e-17 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
OCA4_c33150 YP_005952294.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 3e-33 49
OCA4_c33150 YP_005952294.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 1e-33 46