Gene Information

Name : phoB (OCA4_c32440)
Accession : YP_005952224.1
Strain : Oligotropha carboxidovorans OM4
Genome accession: NC_017538
Putative virulence/resistance : Virulence
Product : phosphate regulon transcriptional regulatory protein PhoB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3426376 - 3427080 bp
Length : 705 bp
Strand : -
Note : -

DNA sequence : 
ATGAGCGCACGAATTCTGGTCGTCGAAGACGAGGAGGCGTTAGCGACGCTGCTTCGCTACAATCTCGATGCGGAAGGTTA
CGACGTCGAAACTGTGGCGCGCGGCGACGAGGCCGACACGAGGCTGAAGGAGCGCGTGCCCGATCTTGTCGTTCTGGACT
GGATGCTGCCGGGCCTGTCCGGCATCGAGCTCTGCCGCAGGCTGCGGGCGCGGCCAGAGACCAAGCAACTGCCGATCATC
ATGCTGACCGCGCGCGGCGAAGAGAGCGAGCGCGTCCGCGGGCTTGCGACCGGCGCTGACGATTACATCGTCAAGCCGTT
CTCGGTGCCGGAGTTGCTGGCGCGGGTGAAGGGCCTGTTGCGACGTGCGAGCCCCGAGCGGGTCGCAAGCGTGCTGATCT
ATGGCGACATCGAACTCGATCGCGAGAAGCGCCGTGTGGCGCGCTCCGGCCGTCCGATCGATCTTGGGCCGACTGAATAC
CGGCTTCTTGAGTTCTTCCTGCAGCATCCGGGGCGCGTGTTCAGCCGCGAGCAGTTGCTTGATGGCGTCTGGGGCCGCGA
CATCTATATCGACGAGCGGACCGTCGACGTGCATATCGGCCGGCTGCGCAAGCTGCTTAATCCCGGTGAGGAGCAGGATC
CCATCCGCACCGTGCGCGGTGCGGGCTATGCGCTCGACGACCGCTTCGCCAAGGCGACGGAGTGA

Protein sequence : 
MSARILVVEDEEALATLLRYNLDAEGYDVETVARGDEADTRLKERVPDLVVLDWMLPGLSGIELCRRLRARPETKQLPII
MLTARGEESERVRGLATGADDYIVKPFSVPELLARVKGLLRRASPERVASVLIYGDIELDREKRRVARSGRPIDLGPTEY
RLLEFFLQHPGRVFSREQLLDGVWGRDIYIDERTVDVHIGRLRKLLNPGEEQDPIRTVRGAGYALDDRFAKATE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42044.1 hypothetical protein Not tested PAI II 536 Protein 5e-35 43
c3565 NP_755440.1 response regulator Not tested PAI I CFT073 Protein 2e-35 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
phoB YP_005952224.1 phosphate regulon transcriptional regulatory protein PhoB AE000516.2.gene3505. Protein 7e-36 46
phoB YP_005952224.1 phosphate regulon transcriptional regulatory protein PhoB NC_010410.6002989.p0 Protein 2e-37 42
phoB YP_005952224.1 phosphate regulon transcriptional regulatory protein PhoB NC_011595.7057856.p0 Protein 2e-37 42
phoB YP_005952224.1 phosphate regulon transcriptional regulatory protein PhoB NC_002952.2859905.p0 Protein 3e-41 42
phoB YP_005952224.1 phosphate regulon transcriptional regulatory protein PhoB NC_013450.8614421.p0 Protein 4e-41 42
phoB YP_005952224.1 phosphate regulon transcriptional regulatory protein PhoB NC_007793.3914279.p0 Protein 4e-41 42
phoB YP_005952224.1 phosphate regulon transcriptional regulatory protein PhoB NC_002745.1124361.p0 Protein 4e-41 42
phoB YP_005952224.1 phosphate regulon transcriptional regulatory protein PhoB NC_009782.5559369.p0 Protein 4e-41 42
phoB YP_005952224.1 phosphate regulon transcriptional regulatory protein PhoB NC_002951.3237708.p0 Protein 4e-41 42
phoB YP_005952224.1 phosphate regulon transcriptional regulatory protein PhoB NC_003923.1003749.p0 Protein 3e-41 42
phoB YP_005952224.1 phosphate regulon transcriptional regulatory protein PhoB NC_002758.1121668.p0 Protein 4e-41 42
phoB YP_005952224.1 phosphate regulon transcriptional regulatory protein PhoB NC_007622.3794472.p0 Protein 3e-41 42
phoB YP_005952224.1 phosphate regulon transcriptional regulatory protein PhoB NC_009641.5332272.p0 Protein 4e-41 42
phoB YP_005952224.1 phosphate regulon transcriptional regulatory protein PhoB BAC0596 Protein 2e-34 42
phoB YP_005952224.1 phosphate regulon transcriptional regulatory protein PhoB BAC0039 Protein 2e-34 42
phoB YP_005952224.1 phosphate regulon transcriptional regulatory protein PhoB NC_002695.1.916589.p Protein 1e-34 42
phoB YP_005952224.1 phosphate regulon transcriptional regulatory protein PhoB CP001138.1.gene2239. Protein 2e-34 42
phoB YP_005952224.1 phosphate regulon transcriptional regulatory protein PhoB CP000034.1.gene2186. Protein 2e-34 42
phoB YP_005952224.1 phosphate regulon transcriptional regulatory protein PhoB CP000647.1.gene2531. Protein 1e-34 42
phoB YP_005952224.1 phosphate regulon transcriptional regulatory protein PhoB CP001918.1.gene3444. Protein 4e-35 42
phoB YP_005952224.1 phosphate regulon transcriptional regulatory protein PhoB HE999704.1.gene1528. Protein 1e-30 41
phoB YP_005952224.1 phosphate regulon transcriptional regulatory protein PhoB NC_002516.2.879194.p Protein 8e-33 41
phoB YP_005952224.1 phosphate regulon transcriptional regulatory protein PhoB NC_010400.5986590.p0 Protein 9e-37 41
phoB YP_005952224.1 phosphate regulon transcriptional regulatory protein PhoB HE999704.1.gene2815. Protein 1e-38 41
phoB YP_005952224.1 phosphate regulon transcriptional regulatory protein PhoB CP004022.1.gene1676. Protein 8e-31 41
phoB YP_005952224.1 phosphate regulon transcriptional regulatory protein PhoB NC_008702.1.4607594. Protein 2e-35 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
phoB YP_005952224.1 phosphate regulon transcriptional regulatory protein PhoB VFG1390 Protein 3e-39 45
phoB YP_005952224.1 phosphate regulon transcriptional regulatory protein PhoB VFG1563 Protein 3e-35 43
phoB YP_005952224.1 phosphate regulon transcriptional regulatory protein PhoB VFG1702 Protein 8e-36 43
phoB YP_005952224.1 phosphate regulon transcriptional regulatory protein PhoB VFG1389 Protein 5e-30 41