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Name : clpB (OCA4_c31210) Accession : YP_005952104.1 Strain : Oligotropha carboxidovorans OM4 Genome accession: NC_017538 Putative virulence/resistance : Virulence Product : chaperone protein ClpB Function : - COG functional category : - COG ID : - EC number : - Position : 3300777 - 3303410 bp Length : 2634 bp Strand : - Note : - DNA sequence : ATGAATATTGAGAAATATACCGACCGGGTGAAGGGATTCATTCAGTCGGCGCAATCGCTGGCGCTGCGCGAGGGCCATCA GCAGTTCTCGCCGCTCCACATCCTGAAGGTGCTGCTCGATGACAGCGAGGGGCTTTCGGGCGGTCTGATCGACCGCGCCG GCGGCAACTCGCGAGCGATCCTGCAGGCAACCGAACAGGCGCTCGCCAAGCTGCCGAAAGTCTCAGGCGGCGGAGCGGGG CAAATTTATCTCGCGCCGGAAACCGCGCGCGCGTTCTCGGCCGCCGAGCAGGCTGCGGAAAAGGCCGGCGACAGTTTCGT GACTGTTGAGCGGCTTCTGCTGGCGCTCTCACTCGACAAGGAAAGCGAGGCGGGCAAGCTCCTCGCTCAGGGCGGTGTTA CGCCACAAAACCTCAATGCCGCGATCAACGCGCTGCGCAAGGGCCGTACCGCCGACAGCGCGTCGGCGGAAAACGCCTAT GACGCGTTGAAGAAATATGCCCGCGACCTCACCCAGGCCGCGCGTGACGGCAAGCTCGATCCGGTGATTGGCCGCGACGA GGAAATCCGCCGCACCATTCAGGTTCTCTCCCGCCGCACCAAGAATAATCCTGTGCTGATCGGTGAGCCCGGCGTCGGCA AGACCGCCATCGTCGAGGGACTTGCCTTACGCATTCTCAACGGCGACGTGCCGGAGAGCCTCAAGGACAAGAAGCTGCTG GCGCTTGACCTCGGCGCGTTGATCGCCGGCGCGAAATATCGCGGCGAGTTCGAGGAGCGGCTCAAGGCCGTGCTGCAGGA AGTCACTGCCGCCGAAGGCGGCATCGTGCTGTTCATCGACGAGATGCACACGCTGATCGGCGCGGGCAAGGCGGATGGCG CGATGGACGCCTCCAACCTGCTCAAGCCGGCATTGGCGCGTGGCGAACTGCACTGCATCGGCGCGACGACGCTCGATGAG TACCGCAAGCATGTCGAGAAGGATGCGGCGCTGGCGCGGCGCTTCCAGCCGGTGTTCGTCTCCGAGCCGACCGTCGAGGA CACGGTCTCGATCCTGCGCGGCCTCAAGGAGAAATACGAACTGCATCACGGCGTGCGCATCGCCGATTCCGCGCTGGTCG CGGCGGCGACGCTGTCGAACCGCTACATCACCGACCGCTTCCTGCCAGACAAGGCGATTGACCTCGTCGACGAGGCGGCG GCGCGGCTGAAGATGCAAATCGATTCCAAGCCGGAAGAGCTCGACTCGCTCGACCGCGAGATCGTGCGGCTGAAGATCGA GCAGGAGGCGCTGAAGAAGGAGACCGATGCGGGCTCCAAGAGCCGGCTGCAGACGCTCGAGACGGATCTGGCCGAACTTG AGAAGAAGTCGGCCGACCTCACCTCGAAGTGGCAGTCGGAAAAGAGCAAGCTTTCGGACGCGCAGAAGCTCAAGAGCGAA CTCGAGCAGGCGCGCACCGAACTCGCCAACGCCCAGCGCAAGGGCGAGTACCAGCGCGCGGGTGAACTGGCCTACGGCCG CATCCCGGAGCTTGAGAAGAAGCTCGCGGCGGTCGAGGCGAGCGAGAGCACGTCCACGATCGACGAGGCGGTTACCGCCG ACAACATCGCGCAGGTGGTGTCGCGTTGGACCGGTGTGCCGGTCGACAAGATGCTGGAAGGCGAGAAGGACAAGCTCCTA CGTATGGAGGAGATGCTCGGCCAGCGTGTCATCGGTCAGGCACAGGCGGTGCGCGCGGTCTCGACCGCGGTGCGGCGTGC GCGTGCCGGCTTGCAGGACCCGAACCGGCCGATCGGCTCGTTCATGTTCTTGGGCCCCACCGGCGTCGGCAAAACCGAGC TCACCAAAGCGCTCGCCGAATATCTTTTCGACGACGAGACCGCACTCGTGCGCATGGATATGTCCGAGTACATGGAGAAG CATTCGGTCGCGCGGCTGATCGGTGCACCTCCGGGCTATGTCGGTTATGACGAGGGCGGTGCGCTTACCGAAGCGGTGCG GCGCCGGCCTTATCAGGTCGTGCTGTTCGACGAGATCGAGAAGGCGCATCCGGACGTGTTCAACGTCCTGTTGCAGGTGC TCGACGACGGCCGTTTGACCGACGGTCAGGGCCGCACCGTCGACTTCCGCAATACGTTGATCATCATGACCTCGAACATC GGCGCGGAATTCCTCGTCAACCAGCCGGAGGGCGAGGATACGGGCGCGGTGCGCGATCAGGTGATGGGCATGGTGCGCAC GCACTTCCGCCCGGAATTCCTGAACCGCATTGATGAGATCATCCTGTTCCATCGCCTGCAGAAGAGCGAGATGGGCCGGA TCGTCGACATCCAGCTCAACCGGCTGCGCAAGCTCCTCGAGGATCGCAAGATCGAACTCCATCTTGATGCGAAGGCGCGT GACTGGCTCGCGGAGAAGGGCTGGGACCCGGCCTATGGCGCGCGTCCGTTAAAGCGCGTGATCCAGCGCAGCGTGCAGGA TTCGCTCGCCGAGATGGTGCTGGCGGGCGAGGTGCTGGACGGTGCGACGGTGAAAATCTCGGCCGGCAAGACCGGGCTGA CCTTCAACGGCAAGCCTGCCTCTCGGATCGAGGATGAAGAGGCCGAGGCGCCGCCGAAGCGGATGATGAACTAA Protein sequence : MNIEKYTDRVKGFIQSAQSLALREGHQQFSPLHILKVLLDDSEGLSGGLIDRAGGNSRAILQATEQALAKLPKVSGGGAG QIYLAPETARAFSAAEQAAEKAGDSFVTVERLLLALSLDKESEAGKLLAQGGVTPQNLNAAINALRKGRTADSASAENAY DALKKYARDLTQAARDGKLDPVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIVEGLALRILNGDVPESLKDKKLL ALDLGALIAGAKYRGEFEERLKAVLQEVTAAEGGIVLFIDEMHTLIGAGKADGAMDASNLLKPALARGELHCIGATTLDE YRKHVEKDAALARRFQPVFVSEPTVEDTVSILRGLKEKYELHHGVRIADSALVAAATLSNRYITDRFLPDKAIDLVDEAA ARLKMQIDSKPEELDSLDREIVRLKIEQEALKKETDAGSKSRLQTLETDLAELEKKSADLTSKWQSEKSKLSDAQKLKSE LEQARTELANAQRKGEYQRAGELAYGRIPELEKKLAAVEASESTSTIDEAVTADNIAQVVSRWTGVPVDKMLEGEKDKLL RMEEMLGQRVIGQAQAVRAVSTAVRRARAGLQDPNRPIGSFMFLGPTGVGKTELTKALAEYLFDDETALVRMDMSEYMEK HSVARLIGAPPGYVGYDEGGALTEAVRRRPYQVVLFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTLIIMTSNI GAEFLVNQPEGEDTGAVRDQVMGMVRTHFRPEFLNRIDEIILFHRLQKSEMGRIVDIQLNRLRKLLEDRKIELHLDAKAR DWLAEKGWDPAYGARPLKRVIQRSVQDSLAEMVLAGEVLDGATVKISAGKTGLTFNGKPASRIEDEEAEAPPKRMMN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 1e-99 | 43 |
| aec27 | AAQ96721.1 | Aec27 | Not tested | AGI-1 | Protein | 3e-100 | 42 |
| aec27 | YP_851418.1 | ATPase | Not tested | PAI II APEC-O1 | Protein | 4e-100 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpB | YP_005952104.1 | chaperone protein ClpB | VFG0079 | Protein | 4e-162 | 51 |
| clpB | YP_005952104.1 | chaperone protein ClpB | VFG2084 | Protein | 2e-106 | 44 |
| clpB | YP_005952104.1 | chaperone protein ClpB | VFG2076 | Protein | 4e-113 | 41 |
