Gene Information

Name : OCA4_c29320 (OCA4_c29320)
Accession : YP_005951924.1
Strain : Oligotropha carboxidovorans OM4
Genome accession: NC_017538
Putative virulence/resistance : Unknown
Product : integrase, catalytic subunit
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3118671 - 3119396 bp
Length : 726 bp
Strand : -
Note : -

DNA sequence :
TTGACTGCCGACATCATCGAGCTTGCCCGCCAATATGGCCGCTACGGGTATCGCCGGATTACGGCGTTGCTCCGCAGAGC
CGGCTGGACGGTGAACAAGAAGCGTGTCGAGCGGATCTGGCGATGTGAGGGGCTGAAGGTCCCTGCTAAACAGCCTAAAC
GCGGGCGTCTGTGGCTCAACGACGGCTCGTGCATCCGCCTGCGGCCGGAGCGCCCCAACCATGTCTGGTCCTATGACTTC
GTCGCTGACCGCACCCACGATGGCAAGGCGTTCCGGATGTTGTGCATCATCGACGAGTTCAGTCGTGAGAGCCTGGCCAT
CCGTGTCGCACGGAAGCTCAAAGCGACGGATGTCATCGAGGCGCTATGCGAGCTGTTCGTCTCGCGGGGCATTCCTGCGC
ACATACGGTCGGACAATGGGCCCGAGTTTGTCGCCCAGGCTCTGCGCGATTGGATCGTCGCCGTCGGCGCCAAGACGGCC
TACATCGAACCCGGAAGTCCGTGGGAGAACGGCTACTGCGAAAGCTTCAACGGCAAACTGCGCGATGAACTACTCAACGG
CGAGATCTTCTACACATTGAAGGAGGCGCAGATCGTGATCGAAAACTGGCGCCGTCACTACAACACGGTCCGTCCACACT
CATCGCTGGGATATCAACCACCCGCACCCGAGGCTCTCGTCTGGCCAGCACCAAAGGAGATAGGCAAAATGCAATCCCTA
AACTAA

Protein sequence :
MTADIIELARQYGRYGYRRITALLRRAGWTVNKKRVERIWRCEGLKVPAKQPKRGRLWLNDGSCIRLRPERPNHVWSYDF
VADRTHDGKAFRMLCIIDEFSRESLAIRVARKLKATDVIEALCELFVSRGIPAHIRSDNGPEFVAQALRDWIVAVGAKTA
YIEPGSPWENGYCESFNGKLRDELLNGEIFYTLKEAQIVIENWRRHYNTVRPHSSLGYQPPAPEALVWPAPKEIGKMQSL
N

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13540.1 insertion sequence IS407 OrfB Not tested PAGI-8 Protein 1e-34 42
unnamed ABR13352.1 insertion sequence IS407 OrfB Not tested PAGI-5 Protein 5e-27 41