Gene Information

Name : rplS (OCA4_c02470)
Accession : YP_005949283.1
Strain : Oligotropha carboxidovorans OM4
Genome accession: NC_017538
Putative virulence/resistance : Unknown
Product : 50S ribosomal protein L19
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 263801 - 264196 bp
Length : 396 bp
Strand : -
Note : -

DNA sequence :
ATGAATCTCATTCAAGAGCTCGAGAAAGAGCAGCTCGACAAGCTCGCCACCGGGAAGACCATTCCCGATTTCGGCCCGGG
CGACACCGTGACCGTCAACGTCAAGGTGAAGGAAGGCGACCGCACCCGCGTGCAGGCCTATGAAGGCGTCTGCATCGGCC
GCAACGGCGGTGGCATCAACGAGAGCTTCACCGTGCGCAAGATTTCCTATGGCGAAGGCGTCGAGCGCGTCTTCCCGATC
TATTCGCCGATGATCGACTCGATCAAGCTCGTGCGTCGCGGCAAGGTGCGTCGCGCCAAGCTGTATTACCTGCGCGGCCG
TCGCGGCAAATCCGCCCGCATCGTCGAGAAGCAGGATCAGCGCCAGACGACGACGGCTGCTGCCGCTGCCGAGTAA

Protein sequence :
MNLIQELEKEQLDKLATGKTIPDFGPGDTVTVNVKVKEGDRTRVQAYEGVCIGRNGGGINESFTVRKISYGEGVERVFPI
YSPMIDSIKLVRRGKVRRAKLYYLRGRRGKSARIVEKQDQRQTTTAAAAAE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rplS CAA68924.1 ribosomal protein L19 Not tested Internalin Protein 2e-27 58
rplS AAS66827.1 50S ribosomal subunit protein Not tested SSR-1 Protein 5e-25 56