Gene Information

Name : ribD (OCA4_c21550)
Accession : YP_005951163.1
Strain : Oligotropha carboxidovorans OM4
Genome accession: NC_017538
Putative virulence/resistance : Unknown
Product : riboflavin biosynthesis protein RibD
Function : -
COG functional category : -
COG ID : -
EC number : 3.5.4.26
Position : 2345060 - 2346199 bp
Length : 1140 bp
Strand : -
Note : -

DNA sequence : 
ATGGCGCAGGCCAGCGCTTCGGCGGCCGTTTCTTCTGAAGACCATCGCTTCATGCAACTCGCGCTCGCGCTCGGCCGGCG
CGGGCAGGGTGCGACTTGGCCGAACCCCGCTGTCGGCGCGGTGGTGGTGAAGGATGGCGTCATTCTCGGGCGTGGCTGGA
CACAGCCCGGTGGCCGCCCGCATGCCGAGCCGCAGGCTTTGCAACGAGCGGGCGAAGCAGCGCGAGGTGCAACGCTCTAT
GTGACGCTCGAGCCGTGCTCGCATTACGGTAAGTCGCCGCCTTGCGTGGATGCGATCATCGTATCCGGCATCGCGCGCGT
GGTGTCGGCGATCGAGGATCCCAATCCGCAGGTGGCGGGACAGGGCCATGTGCGATTGCGGGATGCAGGGATTACGGTAG
ATGTCGGGCTGTGCCGGGACGAAGCGGCTCAGGCGCATTCGGGGCATTTCCTGCGGGTGCGCGAGGGCCGGCCGCACGTC
ACACTTAAGCTCGCGGTCTCGGCCGATGGCAAGATCGCAGCCGCGGGCGGCAAGCCGGTACGGATCACTGGCGAGGCCGC
GAATGCGCGGGTTCACCTTTTGCGCGCGGAAAGCGATGCGATCCTGATCGGCATCGGCACAGCGCTGGCCGACGATCCGC
TGCTGACCTGTCGTTTGCCCGGCATGGAGCATCGCTCGCCAGTGCGTGTGGTGCTTGATCGCGCGCTGCGATTGCCGGGC
GCGAGCCGCCTTGTGCATTCCGCGCGGCAAACGCCGCTGTGGATCATTGCCGCTGAGACGGCGGAGGCCGCGGCTGCGGC
CAGACTCGGCGTCGCCGGGGCGCATCTGTTCCGTCTGCCGGTGGAAGATCGCGCGGCCGGTCTCGATCTGAACGCTGTGT
TGCGGACCTTGTCGGAGCAGGACATCACGCGACTGCTGGTCGAGGGTGGCGCAAAGGTGGCGTCGTCGTTTCTAGCCGCC
CGGCTCGTCGATGAGTTTTGGCTGCTGCAAGGCGCGAAAAGCATCGGTGACGATGGTTTGCCGGCGCTGGAAGGGCAGGA
CCTTGATGCCGTCACCGCATCGTCCGGCTGGCGCATCGACGCAACGCAAATGTTGGGCGATGATCGGCTGACAATCTCCC
GGCGCGTCGAATCCATCTGA

Protein sequence : 
MAQASASAAVSSEDHRFMQLALALGRRGQGATWPNPAVGAVVVKDGVILGRGWTQPGGRPHAEPQALQRAGEAARGATLY
VTLEPCSHYGKSPPCVDAIIVSGIARVVSAIEDPNPQVAGQGHVRLRDAGITVDVGLCRDEAAQAHSGHFLRVREGRPHV
TLKLAVSADGKIAAAGGKPVRITGEAANARVHLLRAESDAILIGIGTALADDPLLTCRLPGMEHRSPVRVVLDRALRLPG
ASRLVHSARQTPLWIIAAETAEAAAAARLGVAGAHLFRLPVEDRAAGLDLNAVLRTLSEQDITRLLVEGGAKVASSFLAA
RLVDEFWLLQGAKSIGDDGLPALEGQDLDAVTASSGWRIDATQMLGDDRLTISRRVESI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00289 YP_008207754.1 Pyrimidine deaminase Not tested AbaR25 Protein 5e-38 43
BJAB0868_00293 YP_008211619.1 Pyrimidine deaminase Not tested AbaR26 Protein 5e-38 43