Gene Information

Name : glnA (OCA4_c21160)
Accession : YP_005951125.1
Strain : Oligotropha carboxidovorans OM4
Genome accession: NC_017538
Putative virulence/resistance : Virulence
Product : glutamate--ammonia ligase
Function : -
COG functional category : -
COG ID : -
EC number : 6.3.1.2
Position : 2306943 - 2308352 bp
Length : 1410 bp
Strand : +
Note : -

DNA sequence :
ATGAAGACCGCCCAAGACGTCCTGAAGGCCATCAAGGACAACGACGTGAAGTACGTCGACCTGCGTTTCACCGATCCGCG
GGGCAAGTGGCAGCACGTCACCTTCGACGTCTCGATGATCGACGAGGAAATCTTCACCGAAGGCACGATGTTCGACGGCT
CCTCGATCGCCGGCTGGAAGGCCATCAACGAGTCCGACATGACGCTGATGCCCGACCCGGTGACCGCGACAATCGACCCG
TTCTTCGCCGAGACCACGATGGTCATCACCTGCGACATTCTCGAGCCGTCGACCGGCCAGCCCTACAACCGCGATCCGCG
CGGCATCGCCCGGAAGGCCGAGGCGATGGTGAAGTCGATGGGCATCGGCGACACCGTCTATGTCGGCCCCGAAGCCGAGT
TTTTCGTGTTCGACGACGTGCGCTTCCAGACCACGCCCTACAACACCGGCTTCAAGCTCGACTCCTCGGAGCTTCCGACC
AATTCCGACACCGAATATGAGGGCGGCAACCTCGGCCACCGCATCCGCACCAAGGGCGGCTACTTCCCGGTGCCACCGCA
GGATTCGATCCAGGACATGCGCTCCGAGATGCTCGGCGCCATGGCCCGCATGGGCGTGAAGGTGGAGAAGCATCACCACG
AGGTCGCTTCCGCCCAGCACGAGCTCGGCATGAAGTTCGACACGCTGACCCACATGGCCGACCAGATGCAGATCTACAAG
TACTGCATCCATCAGGTCGCGCACATCTACGGCAAGACCGCCACCTTCATGCCGAAGCCGGTCTATGGCGACAACGGCTC
GGGCATGCATGTGCACCTGTCGATCTGGAAGGACGGCAAGCCTACCTTCGCCGGCAACAAGTATGCCGACCTGTCGGACA
CCTGCCTCCACTACATCGGCGGCATCATCAAGCACGCCAAGGCGATCAACGCCTTCACCAACCCGTCCACCAACTCCTAC
AAGCGTCTGGTGCCGGGCTATGAGGCTCCCGTGCTGCTCGCCTATTCGGCGCGCAACCGCTCGGCGTCCTGCCGCATCCC
CTACACGACGTCGCCGAAGGCAAAGCGCGTCGAGGTGCGCTTCCCCGATCCGACCGCCAATCCGTATCTCGCTTTCGCGG
CGATGCTGATGGCCGGCCTCGATGGCATCAAGAACAAGATCGATCCGGGCCCGGCGATGGACAAGGACCTTTACGATCTG
CCGAAGGAAGAGCTGAAGCAGATCCCGACCGTGTGCGGCTCGCTCCGCGAGGCGCTTGAGAACCTCGACAAGGACCGCGC
ATTCCTGAAGGCCGGCGGCGTGTTCGACGACGACTTCATCAACAGCTTCATCGAACTCAAGATGACCGAGGTCGAGCGCT
ACGAGATGACCCCTCATCCGGTCGAGTTCGAGCTTTACTACTCGCTGTAA

Protein sequence :
MKTAQDVLKAIKDNDVKYVDLRFTDPRGKWQHVTFDVSMIDEEIFTEGTMFDGSSIAGWKAINESDMTLMPDPVTATIDP
FFAETTMVITCDILEPSTGQPYNRDPRGIARKAEAMVKSMGIGDTVYVGPEAEFFVFDDVRFQTTPYNTGFKLDSSELPT
NSDTEYEGGNLGHRIRTKGGYFPVPPQDSIQDMRSEMLGAMARMGVKVEKHHHEVASAQHELGMKFDTLTHMADQMQIYK
YCIHQVAHIYGKTATFMPKPVYGDNGSGMHVHLSIWKDGKPTFAGNKYADLSDTCLHYIGGIIKHAKAINAFTNPSTNSY
KRLVPGYEAPVLLAYSARNRSASCRIPYTTSPKAKRVEVRFPDPTANPYLAFAAMLMAGLDGIKNKIDPGPAMDKDLYDL
PKEELKQIPTVCGSLREALENLDKDRAFLKAGGVFDDDFINSFIELKMTEVERYEMTPHPVEFELYYSL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glnA YP_003728749.1 glutamine synthetase Not tested cag PAI Protein 5e-109 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
glnA YP_005951125.1 glutamate--ammonia ligase VFG1399 Protein 3e-109 53