Gene Information

Name : ybbA (LMM7_2626)
Accession : YP_005948689.1
Strain : Listeria monocytogenes M7
Genome accession: NC_017537
Putative virulence/resistance : Resistance
Product : putative metabolite uptake ABC transporter, ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2641623 - 2642294 bp
Length : 672 bp
Strand : -
Note : -

DNA sequence : 
ATGACTTTAATAATGAAAAATATTTCTAAAAATTATCAAGATGGCGAGCAAGTCATCGAAGTATTGAAAAATGTTTCTTT
AGAAGTAGCACAAGGAGAATTCGTTGCAATCGTCGGACCTTCTGGCGCTGGGAAAAGTACATTTTTATCAATCGCAGGCG
CTTTATTATCTCCAACAGAAGGCGAAATTGCCATTGGTGGAACGACATTAAATAACATGTCTGAAAAAGCATTAACGAAG
GTGCGACTCGACAAAGTTGGCTTTATTTTCCAAGGTGCCAACTTAATTCCTTACCTAAGTGTTCGTGACCAACTACTCGT
CATTGCGGAATTATCCGGTGAAAAAGGTAGCGCTGCGAAAGAAAGAGCAGATAAATTGCTTCAAGAATTAGGCTTAACCG
CGCGCCAAAACAATTATCCGGAGAGTTTGTCAGGTGGCGAAAAACAACGCGTTGCCATTGCTAGAGCACTCATGAATGAT
CCAGATATTATTCTAGCCGATGAACCCACAGCTAGTTTAGATGCCAACCGCGGACATAAAGTAGTTCAAATGATTGCAGA
TGAAGTAAAACGGAAAAATAAAGCTGCCATCATGGTTACACATGACGAACGAGTGTTAGATTTAGTCGACCGTGTGATTC
GAATTGAAGATGGCTATTTAAAAGCAGAATAA

Protein sequence : 
MTLIMKNISKNYQDGEQVIEVLKNVSLEVAQGEFVAIVGPSGAGKSTFLSIAGALLSPTEGEIAIGGTTLNNMSEKALTK
VRLDKVGFIFQGANLIPYLSVRDQLLVIAELSGEKGSAAKERADKLLQELGLTARQNNYPESLSGGEKQRVAIARALMND
PDIILADEPTASLDANRGHKVVQMIADEVKRKNKAAIMVTHDERVLDLVDRVIRIEDGYLKAE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SARLGA251_00480 YP_005754062.1 ABC-type transport system ATPase Not tested Type-XI SCCmec Protein 6e-44 47
unnamed AAP55232.1 unknown Not tested SaPIbov2 Protein 5e-50 45

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ybbA YP_005948689.1 putative metabolite uptake ABC transporter, ATP-binding protein NC_012469.1.7686878. Protein 5e-40 44
ybbA YP_005948689.1 putative metabolite uptake ABC transporter, ATP-binding protein CP001581.1.gene798.p Protein 2e-37 42
ybbA YP_005948689.1 putative metabolite uptake ABC transporter, ATP-binding protein CP001581.1.gene598.p Protein 2e-36 42
ybbA YP_005948689.1 putative metabolite uptake ABC transporter, ATP-binding protein NC_012469.1.7685735. Protein 3e-33 41