Gene Information

Name : sitB (LMM7_1943)
Accession : YP_005948006.1
Strain : Listeria monocytogenes M7
Genome accession: NC_017537
Putative virulence/resistance : Resistance
Product : putative manganese uptake ABC transporter, ATP binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1936589 - 1937311 bp
Length : 723 bp
Strand : -
Note : -

DNA sequence :
ATGAAAATTCAAGGTTTAACGATAGCATACAAACAAAAAGTGGCGATAGACAATGTCACACTTCAAATAGCATCAGGTAA
ATTAACAGGCATAGTTGGTCCAAATGGGGCTGGCAAATCGACCTTATTAAAAGGAATGATGGGATTAATTCCGCGTGAAC
AAGGACAAGTCACTTTAGCGGATAAACCACTTTCCTACTGGAGAAAGAAAATCGCCTACGTACCGCAACGAAGCGAAGTA
GATTTAACTTTCCCGATTACTGTTTTTGATATGGTGTTGCTCGGAACGTATCCAGCGCTCGGACTAATTAAACGTCCAGG
AAAGAAAGAGAAACAACTCGCATTAGATGCATTAGAGCAAGTGGAAATGACCGGCTTTATGAAACGACAAATTGGTGAAC
TATCTGGTGGTCAATTGCAACGGGTATTCATTGCACGCGCACTTGCCCAACACGCTGAGATTTTCTTTTTAGATGAACCG
TTTGCTGGCATTGATATGACCAGTGAAGCGCTGATAATGCGACTGTTAAAAAAACTAAGAGACAACGGAAAAACGATTGT
CGTCGTGCACCATGATTTTCATAAAGTGGCTGCCTACTTTGATGATATTATTTTACTCAATAAAAAATTAGTAGCGCATG
GCCCAGTGGAACAAACATTTACAGAAGAAAAAATTCAATTTGCTTATGGTGATGCACCGATAGCATTTGCGACAGGGGTG
TAG

Protein sequence :
MKIQGLTIAYKQKVAIDNVTLQIASGKLTGIVGPNGAGKSTLLKGMMGLIPREQGQVTLADKPLSYWRKKIAYVPQRSEV
DLTFPITVFDMVLLGTYPALGLIKRPGKKEKQLALDALEQVEMTGFMKRQIGELSGGQLQRVFIARALAQHAEIFFLDEP
FAGIDMTSEALIMRLLKKLRDNGKTIVVVHHDFHKVAAYFDDIILLNKKLVAHGPVEQTFTEEKIQFAYGDAPIAFATGV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EF0575 NP_814340.1 cationic ABC transporter ATP-binding protein Not tested Not named Protein 8e-54 51
ef0093 AAM75296.1 EF0093 Not tested Not named Protein 6e-54 51

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
sitB YP_005948006.1 putative manganese uptake ABC transporter, ATP binding protein BAC0400 Protein 9e-61 54
sitB YP_005948006.1 putative manganese uptake ABC transporter, ATP binding protein BAC0440 Protein 1e-45 41