Gene Information

Name : arsB (LMM7_1385)
Accession : YP_005947448.1
Strain : Listeria monocytogenes M7
Genome accession: NC_017537
Putative virulence/resistance : Resistance
Product : putative arsenite efflux pump protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1342161 - 1343456 bp
Length : 1296 bp
Strand : +
Note : -

DNA sequence :
ATGCAGATTACTTTAGCTATTTTAGTATTTGCCTTCACGTTATTTTTGGTGATTTGGCAACCAAGAAAATTATCAATCGG
ATGGTCAGCTTGTGGAGGTGCGATAATTGCCTTATTACTTGGCGTCGTCACTTTATCAGATGTCGCAACAGTTACAGGAA
TTGTTTGGAATGCGACGCTCGCTTTTATTGCTATTATAATTATTTCATTGATTTTAGATAAAATTGGCTTTTTTGAGTGG
GCGGCTTTACATATGGCGCGATTAGCAAGAGGTAATGGCTTATTAATGTTCATTCTTATTTCTATTTTGGGAGCTTTCGT
TGCTGCGTTGTTTGCTAATGACGGGGCGGCGCTAATTTTGACACCAATTGTTCTAGCGATGGTGCGAGCGCTGAATTTTG
ATGAGAAAAAGGTATTTCCATTTATTATTGCTAGCGGTTTTATAGCGGATACGACGTCCTTACCGCTCGTAGTTAGTAAT
TTAGTCAATATAGTTTCGGCTGATTTTTTCGGTATTAGTTTTTCGCAGTATGCGCTTATTATGTGGATTCCAACGGTTTT
CTCTTTAGTTGCGAGTATTTTAATCTTATATTTTTATTTTCGGAAAGCATTACCTAAAAAATATGATACGCGAGTGATTC
GAGAGCCGGCTTCTGCAATTAAAGATAAAAAGATGTTTCGTGTTTCTTGGGGAATACTTATCATCCTTGTAGCAGGCTAT
TTTTTGAGTAGTTTTTTAGACATTCCAGTGTCATTTATTGCCTTGCTAGTTGCTGTTATCTTTTTGTTAGTCAGTGCAAA
AAGTCATGCCGTCTCGACAAAAGCTATTTTAAAAGGAGCACCTTGGAATATTGTGTTTTTCTCGGTTGGTATGTATGTAG
TTGTATATGGTTTGCAAAATGTCGGTATCACAAAATTATTATCAGAAGCAATTACATATGTTGCGCACTTTGGATTATTT
GCGGGAACAGTTGGAATGGGATTTATTGCTGCAATACTGTCTTCTGTCATGAATAATTTGCCAACAGTAATGATAAACGC
ACTTGCAATCGATCATACGTCATTTACAGGCGTGATGAAAGAAGCGTTAGTCTATGCAAATGTCATTGGTTCTGATTTAG
GTCCGAAAATAACACCAATTGGCTCGCTAGCAACTTTACTTTGGCTACATGTTCTAGCGCAGAAAGGGATAAAGATAAGC
TGGGGCTCTTATTTCAAAATTGGCATTGTGATTACTATTCCAGTTTTATTCATAACGCTCGTCGGACTATATTTTTCACT
ACTTATTTGGAATTAA

Protein sequence :
MQITLAILVFAFTLFLVIWQPRKLSIGWSACGGAIIALLLGVVTLSDVATVTGIVWNATLAFIAIIIISLILDKIGFFEW
AALHMARLARGNGLLMFILISILGAFVAALFANDGAALILTPIVLAMVRALNFDEKKVFPFIIASGFIADTTSLPLVVSN
LVNIVSADFFGISFSQYALIMWIPTVFSLVASILILYFYFRKALPKKYDTRVIREPASAIKDKKMFRVSWGILIILVAGY
FLSSFLDIPVSFIALLVAVIFLLVSAKSHAVSTKAILKGAPWNIVFFSVGMYVVVYGLQNVGITKLLSEAITYVAHFGLF
AGTVGMGFIAAILSSVMNNLPTVMINALAIDHTSFTGVMKEALVYANVIGSDLGPKITPIGSLATLLWLHVLAQKGIKIS
WGSYFKIGIVITIPVLFITLVGLYFSLLIWN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SH0109 YP_252024.1 arsenical pump membrane protein Not tested SCCmec Protein 3e-124 67
arsB YP_005754065.1 arsenical pump membrane protein Not tested Type-XI SCCmec Protein 1e-119 66
arsB YP_252017.1 arsenical pump membrane protein Not tested SCCmec Protein 3e-119 65
arsB2 YP_001007633.1 arsenical pump membrane protein Not tested YAPI Protein 2e-99 58

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
arsB YP_005947448.1 putative arsenite efflux pump protein BAC0574 Protein 7e-122 66
arsB YP_005947448.1 putative arsenite efflux pump protein BAC0575 Protein 1e-120 65
arsB YP_005947448.1 putative arsenite efflux pump protein BAC0578 Protein 9e-100 59
arsB YP_005947448.1 putative arsenite efflux pump protein BAC0576 Protein 3e-100 58
arsB YP_005947448.1 putative arsenite efflux pump protein BAC0577 Protein 5e-100 58
arsB YP_005947448.1 putative arsenite efflux pump protein BAC0031 Protein 7e-97 57