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Name : clpB (LMM7_1034) Accession : YP_005947097.1 Strain : Listeria monocytogenes M7 Genome accession: NC_017537 Putative virulence/resistance : Virulence Product : Clp protease ATP-binding subunit Function : - COG functional category : - COG ID : - EC number : - Position : 1024006 - 1026180 bp Length : 2175 bp Strand : - Note : - DNA sequence : ATGAACTGTGAAAAATGTAATCAAAATCCAGCAACAATCCAACTATATATGAATATTAATGGCAAGCGTGTAGAAATGCC GCTTTGTGCCTCTTGTTATGCAGAAGTTAGAAATCAAGCCAACTTTGGCGCAAATGAGTTTCCGGGAGCAAGCGGTTCTC CGTTTGACGATATTTTCCGTCAATTGAGTGGTGCTGCTAGTCAAGCAAACCGTGAACAAAGAAGCCAAGCAAACGCACAA GTACAAACACAAACTGCTGGTGGCGGCAATGGTTTACTAGATGAATTTGGAACAAACTTAACAGATATGGCGAAAAATGA GCAACTCGACCCTGTCATCGGTCGTGACAAAGAAATTAAACGCGTCATTGAAATATTAAACCGCCGTAATAAAAATAATC CAGTCTTAATTGGTGAACCAGGTGTTGGTAAAACAGCTGTCGTCGAAGGACTTGCAAATGCGATTGTCGCAGGAGAAGTT CCAAGCAAATTAATGAACAAAGAAGTTATCTTATTAGATGTCGCTTCACTTGTTTCTGGAACAGGGATCCGTGGTCAATT TGAAGAACGCATGAAACAACTAATTAAAGAGCTACAAGAACGTAAAAACACGATTCTATTTATTGATGAAGTGCATACGA TTGTTGGGGCAGGTTCCGCAGAAGGCTCGATGGATGCAGGAAACATTCTAAAACCAGCTCTAGCTCGTGGCGATTTACAA ATGATTGGCGCTACTACGCTAAAAGAGTACCGCACAATCGAAAAAGACGCCGCACTTGAGCGTCGTTTCCAACCAGTAAC TGTAAGCGAACCATCCACAAAAGAAACGCTAACTATTTTAAATGGTTTAAAACCAAAATACGAAGATTTCCATGAAGTAG TTTATTCACCAGAAGCATTATCAGCTGCAGTTGAATTAAGCGCTCGTTACATCCAAGATCGTCATTTGCCAGACAAAGCG ATTGATTTAATGGATGAAGTTGGTTCCAAATACAATCTATCTATTGAAAAATTGGACGAAAATACCGTGAGCGAACGTGT TGCCCGTTTAGAAGAGGAAAAAAATCAAGCTCTTCAAATGGAAGACTACGAAAAGGCAGCTAAAGTTCGTGACGAGATTA CTCGCTTAGAAGAAAATAAAACAAGCAATTCCTTCTCAGAACGCCCAGTCATCCAAGCATCTGATATCCAAGCGATTATT GAAGAAAAAACTGGCATCCCAGTAGGACGTTTACAAGAAGACGAGCAATCCAAAATGAAGAACTTAGAAAGCAACTTAAC TGGTAAAGTTATTGGTCAAGAAGATGCTGTAAGAAAAGTAGCCAAAGCAATTCGTCGTAGTCGTGTTGGACTTAAATCAA AAAATCGCCCAATTGGTTCCTTCCTATTTGTTGGACCAACTGGTGTCGGAAAAACAGAACTTGGACGCACGCTAGCTCGT GAATTATTCGGTACTAGTGAAGCGATGATTCGTTTAGACATGAGTGAATTCATGGAAAAACACAGCGTCTCTAAATTAAT CGGTTCCCCTCCTGGCTATGTTGGTCACGAAGAAGCTGGACAATTAACAGAAAAAGTTCGTCGCAATCCGTATAGCATCA TTTTGTTAGACGAAATCGAAAAAGCACATCCAGACGTTCAACATATGTTCCTGCAAATTTTAGAAGACGGTCGACTAACT GATTCACAAGGACGTACAGTGAGCTTTAAAGATACAGTCATCATTATGACAAGTAACGCTGGCGCAACTGACACAGAAGC TTCTGTCGGCTTTAATACAACAACCGAATCAAAACTTGAAAAAGGTTCTGACATCTTAGCAAAATTAGGTGCATACTTCA AGCCAGAATTCTTAAACCGTCTAGACAGCGTCATTGAATTTAAATCCCTAGAAAAAGACGATTTAGTACAAATCATCGAC TTAATGCTCGTTGATTTAAATGAAATGCTCGCTCAAGAAGATGTGACAATCGATGTTTCTAAAGAAGTAAAAGAACATTT GATTGACCTTGGTTATGACCCTAAATTCGGAGCACGTCCACTACGCCGGACTATCCAAGAACACCTAGAAGATGCCATTG CCGACAGTTTAATTGAACAACCAGAAGCAAAACATCTCGTTGCAACCCTTAACGATAATAAAGAAATTACTATAACAGAA CAAGTAACAGTGTAA Protein sequence : MNCEKCNQNPATIQLYMNINGKRVEMPLCASCYAEVRNQANFGANEFPGASGSPFDDIFRQLSGAASQANREQRSQANAQ VQTQTAGGGNGLLDEFGTNLTDMAKNEQLDPVIGRDKEIKRVIEILNRRNKNNPVLIGEPGVGKTAVVEGLANAIVAGEV PSKLMNKEVILLDVASLVSGTGIRGQFEERMKQLIKELQERKNTILFIDEVHTIVGAGSAEGSMDAGNILKPALARGDLQ MIGATTLKEYRTIEKDAALERRFQPVTVSEPSTKETLTILNGLKPKYEDFHEVVYSPEALSAAVELSARYIQDRHLPDKA IDLMDEVGSKYNLSIEKLDENTVSERVARLEEEKNQALQMEDYEKAAKVRDEITRLEENKTSNSFSERPVIQASDIQAII EEKTGIPVGRLQEDEQSKMKNLESNLTGKVIGQEDAVRKVAKAIRRSRVGLKSKNRPIGSFLFVGPTGVGKTELGRTLAR ELFGTSEAMIRLDMSEFMEKHSVSKLIGSPPGYVGHEEAGQLTEKVRRNPYSIILLDEIEKAHPDVQHMFLQILEDGRLT DSQGRTVSFKDTVIIMTSNAGATDTEASVGFNTTTESKLEKGSDILAKLGAYFKPEFLNRLDSVIEFKSLEKDDLVQIID LMLVDLNEMLAQEDVTIDVSKEVKEHLIDLGYDPKFGARPLRRTIQEHLEDAIADSLIEQPEAKHLVATLNDNKEITITE QVTV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 6e-156 | 50 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpB | YP_005947097.1 | Clp protease ATP-binding subunit | VFG0080 | Protein | 0.0 | 99 |
| clpB | YP_005947097.1 | Clp protease ATP-binding subunit | VFG0079 | Protein | 3e-160 | 53 |
