Gene Information

Name : TIB1ST10_04095 (TIB1ST10_04095)
Accession : YP_005944406.1
Strain : Propionibacterium acnes 6609
Genome accession: NC_017535
Putative virulence/resistance : Virulence
Product : iron(III) dicitrate transport system permease protein FecE
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 874575 - 875384 bp
Length : 810 bp
Strand : -
Note : COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components

DNA sequence : 
ATGGGAAATATCATGGAAACACCTATACTTTCCGGCTCCCACTTGAACGTCACCTTGGGCAATCACAAGATTCTCAATGA
CGTCTCCGTATCATTCCAGGCGGGAGTTATGCACGCCATACTTGGCCCCAACGGTTCTGGGAAGACCACCCTGGTACGCA
CGTTATGCGGAGCCCTCTCCCCCGAGTCAGGGAGCGTCAAATTCGATGGAACGGATCTATCCACGATGTCCGCATCCTGT
ATCGCGCGTCGTATTGCGATCGTCTGGCAGAGCGCGACCGCTCCCTCTGACCTCACCGTACGTCACCTCGTTGGCTACGG
GAGATATGTCCACACACCGTGGTGGCAGATAAGGGACACCAGCGCCGACAACCATGTGGAACAAGCAATGGAGCTGGCCG
ATGTCACGTGCTTCGCCGATCGACGCGTCACCACTCTTTCAGGCGGACAGCGACAGAAAGTGTGGCTGGCGGCGGCCCTG
GCACAGGAACCCACTGTCCTTATCCTCGATGAGCCCACAACCTATCTGGATGTCACCCATCAACTGCGAGTCCTCGATCT
TGTTCGATCGCTGAACCAGGAACGGGGAATCACCGTCATAGCCGTCATGCATGACCTCACTCAAGCCGCCCGCTATTGCG
ACAGATGCGCCATTCTTAAAAATGGCCAGCTGACACTCGAAGGACCACCTGACGCGCTATCCTCCGGGCCCATCGAAGAG
AACTTCGACATCGAAGCGTGGATTACGACGGATCCCCAAGGCAAGCTCCCAGTCATCCAACCACGTCGCCCCTTGAAGGA
AGCACGATGA

Protein sequence : 
MGNIMETPILSGSHLNVTLGNHKILNDVSVSFQAGVMHAILGPNGSGKTTLVRTLCGALSPESGSVKFDGTDLSTMSASC
IARRIAIVWQSATAPSDLTVRHLVGYGRYVHTPWWQIRDTSADNHVEQAMELADVTCFADRRVTTLSGGQRQKVWLAAAL
AQEPTVLILDEPTTYLDVTHQLRVLDLVRSLNQERGITVIAVMHDLTQAARYCDRCAILKNGQLTLEGPPDALSSGPIEE
NFDIEAWITTDPQGKLPVIQPRRPLKEAR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
phuC YP_005682167.1 Iron(III) dicitrate transport permease-like protein yusV Virulence PiCp 7 Protein 1e-30 42
phuC YP_005684259.1 Iron(III) dicitrate transport permease-like protein yusV Virulence PiCp 7 Protein 1e-30 42
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 8e-40 42
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 8e-40 42
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 8e-40 42
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 8e-40 42
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 7e-40 41
phuC YP_005686351.1 Iron(III) dicitrate transport permease-like protein yusV Virulence PiCp 7 Protein 2e-30 41
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 2e-43 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
TIB1ST10_04095 YP_005944406.1 iron(III) dicitrate transport system permease protein FecE BAC0164 Protein 4e-40 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
TIB1ST10_04095 YP_005944406.1 iron(III) dicitrate transport system permease protein FecE VFG1042 Protein 4e-40 41