Gene Information

Name : TIB1ST10_09005 (TIB1ST10_09005)
Accession : YP_005945352.1
Strain : Propionibacterium acnes 6609
Genome accession: NC_017535
Putative virulence/resistance : Unknown
Product : riboflavin biosynthesis protein RibD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1912579 - 1913574 bp
Length : 996 bp
Strand : -
Note : COG0117 Pyrimidine deaminase

DNA sequence :
ATGGATCAGCGATGGGACGACGCTATGGCGCTCGCCTTGGATATGGCCGCGAAATCACCATGCCCGGATCCGAACCCGCG
TGTCGGCTGTGTCATTGTCGCTGAGGACCGGGTGATAGGTCAGGGTTGGCACCGCGGAGCGGGAACTCCACACGCTGAGG
TGGAGGCACTGCGCCAGGCTGGCGATGATGCCAGGGGAGCCACCGCCGTCGTCACCTTGGAGCCCTGTCATCACACCGGG
CGTACCGGACCGTGCAGCCATGCCCTGGTCGACGCCGGGATTGCCCGGGTTGTCATCGCCCAGTCGGATCCCAACCCGGT
GGCATCCGGGGGAGAACAGTGGCTGCGTACCCACGGCGTCGAGGTGGTCACCGGGGTTCTTTCCGAGGAAGCCACAGCCC
TCAACGCCGATTGGACCTTCAGCCAGATCCACCGACGCCCCCGGGTGTGCTGGAAGTACGCCGCGAGCCTCGACGGACGC
AGCGCTGCCCCCGACGGAACCAGCCAGTGGATCACCGGGGAACAGGCCCGCCACCAGGTGCAGCTCGGCCGGGCTCGGTG
CGGGGCGATCATCGTCGGCACCGGAACTGCCTTGGCCGATAACCCGAGGCTGACGGTTCGGCTGCCCGGCGTCACCCACC
AACCCCTACGAGTCGTGGTGGGCATGCGAGAACCGCCTGCTGGGTGTCATTTGCGTGACGACTCGGCCTCGACCTTGCAC
ATTCCCAGCCACGACCCTGCTGAGGTGCTGGACCTCCTGTGGTGCCGCGGTGTTCACCGTGTCTGGCTGGAGGGCGGACC
ACAACTGGCCGGAGCCTTCCTCGCGGCCAACCTGGTCGACGAGGTCATCGCCCACATGGCACCGACGGTGTTGGGAGACG
GTCGAGCAGCAGTCGTCGACCCCACCGTCGCCACTTTGTCCCAGGCACACCACTTCGTCATCGACGACGTGACCCAGTTG
GGCCCCGACATCCAGATTCACGCACATCATGAGTGA

Protein sequence :
MDQRWDDAMALALDMAAKSPCPDPNPRVGCVIVAEDRVIGQGWHRGAGTPHAEVEALRQAGDDARGATAVVTLEPCHHTG
RTGPCSHALVDAGIARVVIAQSDPNPVASGGEQWLRTHGVEVVTGVLSEEATALNADWTFSQIHRRPRVCWKYAASLDGR
SAAPDGTSQWITGEQARHQVQLGRARCGAIIVGTGTALADNPRLTVRLPGVTHQPLRVVVGMREPPAGCHLRDDSASTLH
IPSHDPAEVLDLLWCRGVHRVWLEGGPQLAGAFLAANLVDEVIAHMAPTVLGDGRAAVVDPTVATLSQAHHFVIDDVTQL
GPDIQIHAHHE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00289 YP_008207754.1 Pyrimidine deaminase Not tested AbaR25 Protein 6e-40 41
BJAB0868_00293 YP_008211619.1 Pyrimidine deaminase Not tested AbaR26 Protein 6e-40 41