Gene Information

Name : clpB (PAZ_c21090)
Accession : YP_005943264.1
Strain : Propionibacterium acnes 266
Genome accession: NC_017534
Putative virulence/resistance : Virulence
Product : chaperone protein ClpB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2145202 - 2147775 bp
Length : 2574 bp
Strand : -
Note : -

DNA sequence :
ATGGACACCAATCTCACCACGATGAGCCGTGACGCGGTCACCGCCGCTACTCGGCATGCGTTGGCCCACGGGAACCCATC
CGTGGAGCCCTCGCATCTTCTTCACGCACTGTTCACGATCCCAGACAACACTGTCAGTCCGTTGGTAGCTGGCTTGGGGA
TTGATCCTCAGCAGGTCGACGCCGTCGCTACCGCAGCGATGCGCTCCCTTCCGTCAAGTACCGGCGCCTCAATAGCTCAG
CCGCAGCTGTCCGGGGCCTTCGCCCGAGTCATCGCCGACGCGCAGAACCGTGCCGAGGCCATGGGCGATTCCTTCGTCGC
TACCGAGCATCTTCTTATTTCGCTGACGGCGGTTCCCTCCGACGTCCAGAACGGCCTGGCAGGGCTCGGCCTCAAGCCCG
ACTCCCTCGCGGCGGCCTTCAATGAAGGTCGTGGAGACCGTCGTGTCACCTCCGAGGAGTCCGAGGGAGGCGAATCGGCT
CTCGCCAAGTACTCCGTCGATCTCACCGAGCGCGCCCGTGCCGGCAAGCTCGACCCCGTCATTGGTCGTGACCAGGAGAT
TCGCCGCGTCGTCCAGGTGTTGGCGCGACGCACTAAGAACAACCCGGTCCTTATCGGTGAACCGGGGGTCGGCAAGACTG
CCGTCGTCGAGGGGTTGGCTCAGCGCGTCGTCGCCGGGGACGTTCCCGACTCTCTCAAAGGGCGTCGCGTCGTCTCTTTG
GATCTGTCCTCCATGGTTGCCGGGGCTAAATACCGCGGCGAGTTTGAGGAGCGCCTCAAGGCCGTCCTCAACGAGATCAA
GGAGGCCGAGGGGCAGATCATTACCTTTATCGATGAGCTGCACACCGTCGTCGGCGCCGGGGCTTCCGGAGAGGGAGCAA
TGGACGCTGGCAATATGCTCAAGCCGATGCTGGCCCGTGGCGAGCTGCGAATGATCGGTGCCACTACCCTCGACGAGTAC
CGCGAGCATATTGAGAAGGACCCAGCTCTGGAGCGTCGTTTCCAGCAGGTCTTTGTCGGTGAACCGTCGGTTGAGGACAC
TATTGCCATCCTGCGCGGCTTGCGAGAGCGCTACGAGGCCCACCACAAGGTGCGTATTACTGACGGAGCCCTTGTCGCGG
CCGCCAGCTTGTCTCACCGGTGCATCACCGCCCGTCAGCTTCCTGACAAGGCCATTGACCTTATCGACGAGGCTGCGTCT
CGGCTGCGCATGGAGATTGACTCCTCTCCGGAGGAGATCGACACCCTGCGCCGTGAAGTCGACCGCATGAAGATGGAGAT
CTTCGCCGTCGAGAAGGAGGACGACCCGGCCAGCCAGCAGCGCCTAACGAGGTTGCGCGCTGACATGGCTGACAAGGAGG
AGACCCTGCGCGGCCTGGAGTCGCGCTGGGAGGCTGAGAAGGCTGGTCTCAACAAGGTCGGTGAGCTCAAGACAAGGATT
GACGAGTTGCGGACTGCGGCCGACAAGTACCAGCGCGAGGGCGACTTCGGGCGAGCGTCCGAGATCCTCTACGGTCAGAT
TCCCGGCCTTGAGAAGGAGATGGAGGCTGCTGCCAAGGCTGAGGAGGAGACCCCACGGATGGTGTCCGAGGAGGTCGGTA
CCTCCGACATTGCCGAGGTTGTTTCCTCGTGGACCGGCATCCCCGTGGGGCGGATGATGCAAGGCGAGCAGGAGAAGCTG
CTCCATATGGAGGAGCGGCTGCACGAACGTCTTATTGGTCAGGATCGAGCTGTCAAGACCGTCTCGGATGCGGTGCGTCG
CTCCCGGGCCGGAATCAGCGACCCGAACCGTCCGACTGGCTCGTTCCTCTTCCTGGGCCCCACGGGCGTCGGCAAGACCG
AGTTGGCCAAGTCCCTGGCGGAGTTCCTCTTCGACGACGAGACCGCTCTGGTGCGTATTGACATGAGTGAGTACATGGAG
AAGCACTCCGTCTCACGTCTGGTCGGTGCCCCTCCGGGTTACATCGGTTACGAAGAGGGCGGTCAGCTTACCGAAGCTGT
GCGGCGTCGCCCCTACTCGGTTATCTTGCTCGACGAGGTGGAAAAGGCTCATTCCGACGTCTTTAACATTTTGTTGCAGG
TGCTCGACGACGGTCGTCTGACTGACGGCCAAGGACGCACGGTGGATTTCCGCAACACCATTTTGGTCTTGACGAGCAAT
CTGGGTAGCCAATTCCTGTCAGACGCGAGCCTTGATGACCATGCTAAGCGTGAGGCCGTCATGGGGGCGGTGCGTCAGGC
GTTTCGACCCGAGTTCCTGAATCGACTCGACGATGTGGTCATGTTCGACCCGTTGTCGATGGCCGATCTGGGACGGATCG
TCGAGACGAACCTGGCTAAGCTCAATTCACGGCTGGCCGAGCGGCGCATCACCATTGCCGTGACCGACGCCGGTAAGGAC
TGGCTGGCCATGGCGGGTTTCGACCCGATCTACGGTGCCCGACCACTGCGTCGCCTGATGCAGACCACCATCGATGATCA
GCTGGCTCGCAAGGTGTTGTCTGGGCAAGTGCAGGAGGGCGATACGGCGACCTTTGACATCAACGAGGCCGGTGACGGTT
TGGTGATTCTCTGA

Protein sequence :
MDTNLTTMSRDAVTAATRHALAHGNPSVEPSHLLHALFTIPDNTVSPLVAGLGIDPQQVDAVATAAMRSLPSSTGASIAQ
PQLSGAFARVIADAQNRAEAMGDSFVATEHLLISLTAVPSDVQNGLAGLGLKPDSLAAAFNEGRGDRRVTSEESEGGESA
LAKYSVDLTERARAGKLDPVIGRDQEIRRVVQVLARRTKNNPVLIGEPGVGKTAVVEGLAQRVVAGDVPDSLKGRRVVSL
DLSSMVAGAKYRGEFEERLKAVLNEIKEAEGQIITFIDELHTVVGAGASGEGAMDAGNMLKPMLARGELRMIGATTLDEY
REHIEKDPALERRFQQVFVGEPSVEDTIAILRGLRERYEAHHKVRITDGALVAAASLSHRCITARQLPDKAIDLIDEAAS
RLRMEIDSSPEEIDTLRREVDRMKMEIFAVEKEDDPASQQRLTRLRADMADKEETLRGLESRWEAEKAGLNKVGELKTRI
DELRTAADKYQREGDFGRASEILYGQIPGLEKEMEAAAKAEEETPRMVSEEVGTSDIAEVVSSWTGIPVGRMMQGEQEKL
LHMEERLHERLIGQDRAVKTVSDAVRRSRAGISDPNRPTGSFLFLGPTGVGKTELAKSLAEFLFDDETALVRIDMSEYME
KHSVSRLVGAPPGYIGYEEGGQLTEAVRRRPYSVILLDEVEKAHSDVFNILLQVLDDGRLTDGQGRTVDFRNTILVLTSN
LGSQFLSDASLDDHAKREAVMGAVRQAFRPEFLNRLDDVVMFDPLSMADLGRIVETNLAKLNSRLAERRITIAVTDAGKD
WLAMAGFDPIYGARPLRRLMQTTIDDQLARKVLSGQVQEGDTATFDINEAGDGLVIL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0294 NP_454876.1 ClpB-like protein Not tested SPI-6 Protein 9e-107 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
clpB YP_005943264.1 chaperone protein ClpB VFG2084 Protein 3e-110 43