Gene Information

Name : yfeA (PAJ_p0087)
Accession : YP_005941052.1
Strain :
Genome accession: NC_017533
Putative virulence/resistance : Virulence
Product : periplasmic iron-binding protein YfeA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 96302 - 97207 bp
Length : 906 bp
Strand : -
Note : similar to Enterobacter sp. 638, periplasmic solute binding protein (NCBI: YP_001175843.1) COG: inorganic ion transport and metabolism subcellular localization as predicted by Psort 2.0: periplasmic

DNA sequence : 
GTGAGTAAATTATCGGTTTCAACACTTGGCATGATGTTGAGTGTTTTTATTAGCCTCAACAGCTATGCGGCTGATAAATT
TAAGGTTGTCACGACCTTCACCGTTATTGCTGACATGGCAAAAAATGTGGCAGGGGAGGCGGCTGAGGTGACGTCAATCA
CCAAACCTGGTGCCGAAATTCATGAGTATCAACCGACCCCTGGCGATATTAAACGTGCACAGGGTGCACAGTTGGTGATG
GCTAATGGTTTGAATCTGGAATTGTGGTTTCAACGTTTTTATCAACATCTCAAAGGCGTTCCTGAAGTTGTTGTTTCAAC
GGGCGTTTCTCCGATAGGAATAGGGGAAGGACCTTATAATGGCAAACCCAATCCTCACGCATGGATGTCACCGGATAACG
CACTGATCTATGTGGATAATATTCGTGATGCGCTTGTAAAGCACGATCCGGCCAATGCCAGCACCTATCAGCAGAACGCA
GCCGCCTATAAGCAAAAGATCGTTGCAGCACTCGAACCTGTTCGTAAGCAACTCGCCGCCATACCAGAAAACAAACGCTG
GATAGTGACCAGCGAAGGCGCTTTTTCCTATCTGGCACGTGATTTAGGGCTTAAAGAACTTTATCTCTGGCCAATCAATG
CCGATCAGCAGGGAACGCCACAGCAGGTTCGGAACGTCATCGATCAGATGAAAAAGAATGCCATTCCCGTCATCTTCAGT
GAAAGCACCGTCTCCGATAAACCTGCACGCCAGGTCGCGCGCGAAACGCACGCACATTATGGCGGTGTGTTATACGTTGA
CTCATTAAGCGCGGCCAGGGGGCCTGTGCCAACGTATCTTGACCTGTTGAGAGTTACCACCCAGACGCTGGTTAACGGCA
TTCAGGACGGGATGAAAACACGATGA

Protein sequence : 
MSKLSVSTLGMMLSVFISLNSYAADKFKVVTTFTVIADMAKNVAGEAAEVTSITKPGAEIHEYQPTPGDIKRAQGAQLVM
ANGLNLELWFQRFYQHLKGVPEVVVSTGVSPIGIGEGPYNGKPNPHAWMSPDNALIYVDNIRDALVKHDPANASTYQQNA
AAYKQKIVAALEPVRKQLAAIPENKRWIVTSEGAFSYLARDLGLKELYLWPINADQQGTPQQVRNVIDQMKKNAIPVIFS
ESTVSDKPARQVARETHAHYGGVLYVDSLSAARGPVPTYLDLLRVTTQTLVNGIQDGMKTR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitA NP_461782.1 periplasmic binding protein Virulence SPI-1 Protein 4e-109 75
sitA YP_217781.1 iron transporter: fur regulated Virulence SPI-1 Protein 2e-109 75
sitA AAD41065.1 SitA Virulence centisome 63 pathogenicity island Protein 3e-109 75
sitA NP_457255.1 Iron transport protein, periplasmic-binding protein Virulence SPI-1 Protein 4e-109 75
sitA NP_806464.1 iron transporter periplasmic-binding protein Virulence SPI-1 Protein 4e-109 75

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
yfeA YP_005941052.1 periplasmic iron-binding protein YfeA BAC0349 Protein 2e-109 75
yfeA YP_005941052.1 periplasmic iron-binding protein YfeA BAC0439 Protein 1e-88 64

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
yfeA YP_005941052.1 periplasmic iron-binding protein YfeA VFG0525 Protein 2e-109 75