Gene Information

Name : yfeC (PAJ_p0085)
Accession : YP_005941050.1
Strain :
Genome accession: NC_017533
Putative virulence/resistance : Virulence
Product : chelated iron transport system membrane protein YfeC
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 94627 - 95487 bp
Length : 861 bp
Strand : -
Note : similar to Enterobacter sp. 638, ABC-3 protein (NCBI: YP_001175845.1) COG: inorganic ion transport and metabolism subcellular localization as predicted by Psort 2.0: inner membrane

DNA sequence : 
ATGACCGCGCTACTTGAACCTTTTGGTTATCAATATATGTTGAACGCCATGTGGATTTCAGCCATGGTCGGCGGGCTGTG
CGCCTTTCTGTCCTGTTATCTGATGTTAAAGGGCTGGTCGCTTATTGGTGATGCGCTGTCACACTCTATTGTTCCCGGTG
TCGCGGGCGCTTACATGCTCGGACTGCCGTTTGCGTTGGGCGCTTTTTTATCAGGGGGCTTAGCGGCAGGGAGCATGCTG
TTGCTCAACCAGCGCACGCGGCTGAAAGAAGATACCATCATCGGCCTGATTTTTTCTTCGTTCTTCGGCCTTGGGCTGTT
TATGGTTTCCCTCAATCCCACTTCGGTAAATATTCAGACTATCGTGCTGGGCAATATTCTGGCTATTGCGCCTTCCGATA
TCATTCAACTGCTTATTACCGGACTGACTTCTGTCGCCATTTTGTTTTTCAAATGGAAAGATTTAATGGTCACCTTTTTT
GATGAAAACCATGCTCGCGCCGTTGGTTTAAATCCGGTGCGTCTTAAGATCTTATTTTTCACTTTGTTGGCCGTTTCGAC
CGTGGCTGCGTTACAAACTGTGGGCGCGTTTCTGGTTATCTGTCTGGTTGTCACGCCAGGCGCAACGGCCTGGTTGCTGA
CCGATCGCTTTCCCCGGCTACTTGCCATCGCGGTTGCCATTGGCAGCATCACGAGCTTTATGGGCGCGTGGGCAAGTTAT
TATCTTGATGGCGCAACGGGCGGCATTATTGTCGTTGCGCAAACGTTACTGTTTTTACTGGCCTTCATCTTTGCGCCTAA
GCACGGTGTGCTGGCGAATCGTCGTCGTGCCCAGGCGCATGCTGTGCGGGAGACAAGATGA

Protein sequence : 
MTALLEPFGYQYMLNAMWISAMVGGLCAFLSCYLMLKGWSLIGDALSHSIVPGVAGAYMLGLPFALGAFLSGGLAAGSML
LLNQRTRLKEDTIIGLIFSSFFGLGLFMVSLNPTSVNIQTIVLGNILAIAPSDIIQLLITGLTSVAILFFKWKDLMVTFF
DENHARAVGLNPVRLKILFFTLLAVSTVAALQTVGAFLVICLVVTPGATAWLLTDRFPRLLAIAVAIGSITSFMGAWASY
YLDGATGGIIVVAQTLLFLLAFIFAPKHGVLANRRRAQAHAVRETR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitC NP_457257.1 Iron transport protein, inner membrane component Virulence SPI-1 Protein 4e-86 86
sitC NP_806466.1 iron transporter inner membrane protein Virulence SPI-1 Protein 4e-86 86
sitC AAD41067.1 SitC Virulence centisome 63 pathogenicity island Protein 4e-86 86
sitC YP_217783.1 iron transporter: fur regulated Virulence SPI-1 Protein 5e-86 86
sitC NP_461784.1 permease Virulence SPI-1 Protein 5e-86 86
sitD AAD41068.1 SitD Virulence centisome 63 pathogenicity island Protein 4e-36 43
sitD NP_461785.1 permease Virulence SPI-1 Protein 6e-36 43
sitD NP_457258.1 Iron transport protein, inner membrane component Virulence SPI-1 Protein 1e-35 42
sitD NP_806467.1 iron transporter inner membrane protein Virulence SPI-1 Protein 1e-35 42
sitD YP_217784.1 iron transporter: fur regulated Virulence SPI-1 Protein 1e-35 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
yfeC YP_005941050.1 chelated iron transport system membrane protein YfeC BAC0351 Protein 3e-86 86
yfeC YP_005941050.1 chelated iron transport system membrane protein YfeC BAC0441 Protein 3e-65 68
yfeC YP_005941050.1 chelated iron transport system membrane protein YfeC BAC0352 Protein 3e-36 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
yfeC YP_005941050.1 chelated iron transport system membrane protein YfeC VFG0527 Protein 2e-86 86
yfeC YP_005941050.1 chelated iron transport system membrane protein YfeC VFG0528 Protein 2e-36 43