Gene Information

Name : yliA (PAJ_p0244)
Accession : YP_005941209.1
Strain :
Genome accession: NC_017533
Putative virulence/resistance : Unknown
Product : ABC transporter ATP-binding protein YliA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 273127 - 274992 bp
Length : 1866 bp
Strand : -
Note : similar to Pantoea sp. At-9b, oligopeptide/dipeptide ABC transporter, ATPase subunit (NCBI: ZP_05732523.1) COG: amino acid transport and metabolism subcellular localization as predicted by Psort 2.0: inner membrane

DNA sequence :
ATGACGGACACACGACTCACTTCTTCTGCCAACAGTGCCGCCGGTTCATCACCCGTGCTTGATATTCGGGATCTCAGCGT
CTCATTTCGTGGGCGCAGCGGCGAGAATCAGGCACTAAAAGGCATCAGTTTTGCCATTAATCCGGGCGAAATTGTCGCCG
TAGTGGGTGAGAGTGGCTCAGGGAAATCAGTCACTTCTTTGGCCGTAATGGGCTTACTGGCGAACAGCGGCCGTATCGAT
CGCGGCAGCATGCAGTTTCGCGATCGTGGCGGAAAAGTACATGCGCTGGAAACACTGGATGAAAATCAGCGCCGCACGTT
GCGTGGTCGTGAAATGGCGATGATCTTTCAGGAGCCCATGACCTCGCTGAATCCGGTGCTGCGCGTCGATGACCAGCTCA
CTGAAGCGTTACGCGATCATCAACAGTGCGACAAGAAAGAAGCGCATGCGCGCGTGCGTGAATTGCTTCGACAGGTGCGT
ATTGCCGATGTGGATCGTGTCATGAAAAGCTATCCGCACGCGCTCTCAGGCGGTATGCGCCAGCGGGTGATGATTGCGCA
GGCGCTGGCCTGTGATCCGCAACTTCTGATTGCTGACGAACCTACAACGGCGCTGGACGTTACCGTGCAGGCGCGCATTC
TGCACATTCTGCGTGAGCTGCAACGCGAGAAACAGATGGCGGTGCTGTTTATCACTCACGATATGGGCGTCGTGGCTGAA
ATCGCCGATCGTGTCGTGGTCATGCTGCGTGGCGAAGTCGTCGAACAGGGTAGCGTCGCAGCGGTTTTTGCCGCCCCGCA
GCACCCGTATACCCAGGCTTTGCTGGCGGCGGTGCCGAGACTGGGCGACATGCGCGAATATGCGTGGCCGCAACGCTTTC
CGCTGCTTGGGACACAGAGTACCGTCGAAAATGAACAGCATACCGCGCGCTACGACACCGCGCCGTTGCTCGATGTGCGT
GGTTTGAAAGTCTACTATCCCATCCGCAGCGGCATCTTTTCGACGCTCACGCATCATGTCCATGCGGTTGAGCAGATTGA
TTTCAGTCTGTGGCCAGGTGAAACCCTGGCGATCGTGGGCGAAAGCGGCTGCGGCAAATCGACGACCGGCCGTGCGCTGA
TGCGCCTGATCAACAGTGACGCCGAAAGCATTCACTTCGAAGGGAAAGAAATCTCTCACCTGAAAGAGGCAGCATTCCAG
CCGCTCCGCCGTGAAATTCAGATGGTGTTTCAGGATCCCTACGCCTCACTGAACCCTCGGCTTACCGTGGGTTTCACCAT
TGCCGAGCCCTTGCTGTTACATGGCATGGTGTCCTCACTGGAACAGGCTTCGCCACAGATAGATGCGTTGCTGAAGAGCG
TTGGTCTGCTGCCCGAGCACGCGCGTCGGTATCCACACGAATTTTCAGGTGGTCAGCGCCAGCGTATTGCCATTGCCCGC
GCCATGGCCCTGAAGCCCAAAGTGATTATTGCTGATGAAGCGGTATCGGCCCTTGACGTCTCCATTCAGGCGCAGGTGGT
GAACCTGATGATGGATCTGCAGCAGCAAACGGGCGTGGCGTGGATTTTCATCTCTCACGATATGGCGGTCGTCGAGCGCA
TTGCCAACCGTGTGGCGGTGATGTACCTCGGCCAGATTGTGGAGCTTGGGCCGCGTCAGTCGGTATTTAATCAGCCGCAA
CATCCTTATACCCAACGCCTGCTGGCCTCCGTGCCGGTGGCGGATCCCGAGAACCGTCAGCCCCGTATTATCGATGACAG
CGAAATCCCTTCGCCGTTAAGAAAAGTGGGCGAAACGGTCACTAAACCCCGTTATCGACAGGTTGCGCCTCAGCACTGGG
TCGCTGACGGCATTGCATTGCGATAA

Protein sequence :
MTDTRLTSSANSAAGSSPVLDIRDLSVSFRGRSGENQALKGISFAINPGEIVAVVGESGSGKSVTSLAVMGLLANSGRID
RGSMQFRDRGGKVHALETLDENQRRTLRGREMAMIFQEPMTSLNPVLRVDDQLTEALRDHQQCDKKEAHARVRELLRQVR
IADVDRVMKSYPHALSGGMRQRVMIAQALACDPQLLIADEPTTALDVTVQARILHILRELQREKQMAVLFITHDMGVVAE
IADRVVVMLRGEVVEQGSVAAVFAAPQHPYTQALLAAVPRLGDMREYAWPQRFPLLGTQSTVENEQHTARYDTAPLLDVR
GLKVYYPIRSGIFSTLTHHVHAVEQIDFSLWPGETLAIVGESGCGKSTTGRALMRLINSDAESIHFEGKEISHLKEAAFQ
PLRREIQMVFQDPYASLNPRLTVGFTIAEPLLLHGMVSSLEQASPQIDALLKSVGLLPEHARRYPHEFSGGQRQRIAIAR
AMALKPKVIIADEAVSALDVSIQAQVVNLMMDLQQQTGVAWIFISHDMAVVERIANRVAVMYLGQIVELGPRQSVFNQPQ
HPYTQRLLASVPVADPENRQPRIIDDSEIPSPLRKVGETVTKPRYRQVAPQHWVADGIALR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
dppD YP_005160017.1 putative peptide ABC transport system ATP-binding protein Not tested Not named Protein 3e-96 42