Gene Information

Name : PAJ_p0136 (PAJ_p0136)
Accession : YP_005941101.1
Strain :
Genome accession: NC_017533
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 143862 - 145361 bp
Length : 1500 bp
Strand : +
Note : similar to Salmonella enterica subsp. Arizonae serovar 62:z4,z23, hypothetical protein SARI_02733 (NCBI: YP_001571731.1) COG: unkown function subcellular localization as predicted by Psort 2.0: unkown

DNA sequence :
GTGCTTGAACGTCCTGTCGCAGGTGGAGTTTATGCGTCCCTGTTTGAAAAAATTAATCTGAACCCGGTTTCTGAGCTGAG
TGCGCTGGATATCTGGCAGGATGCACAGGCGATGTCGGATGCGACTGCCGATGAACGATTAACTGCCGGCATGCAGGTGT
TTATCGAATGCCTGACAAAATCAGGCTCAAAAGTTGAAAAACTCGACAAGCATCTGATTGACCATCACATCGCGGCGCTG
GATGACCAGATTAGTCGTCAGCTTGATGCCGTTATGCATCACGAGGACTTTCAGGCAGTAGAAAGCCTGTGGCGCGGCGT
GAAATCCCTTGTCGACAAAACCGATTTTCGTCAGAACGTCAAAATTGAACTGCTGGATATGTCTAAAGAAGACCTGCGTC
AGGACTTCGAAGACAGCCCCGAAATTATCCAGAGCGGGCTGTATAAACATACCTATATTGATGAATACGATACGCCGGGT
GGCGAGCCGATTGCCGCGCTGATTTCCGCTTACGAATTTGATGCGTCTGCGCAGGATGTCGCTCTGCTGCGCAACATTTC
GAAAGTGTCTGCCGCTGCGCATATGCCGTTTATCGGCTCTGCCGGCCCGACGTTCTTCCTCAAGGACTCCATGGAGGAAG
TGGCGGCCATCAAGGATATTGGTAATTACTTTGACCGCGCGGAATACATCAAGTGGAAATCCTTTCGCGAAACAGACGAT
TCCCGCTACATCGGTCTGGTCATGCCGCGCGTACTGGGCCGCTTACCCTATGGTCCGGACACCGTGCCTGTTCGTAGTTT
CAATTACGTGGAAGAAGTGAAAGGCCCGGATCATGACAAATACCTGTGGACCAACGCCTCGTTTGCTTTTGCCTCCAATA
TGGTGCGCAGCTTCATCAATAACGGCTGGTGCGTGCAAATTCGTGGCCCGCAGGCCGGTGGTGCCGTTCAGGACCTGCCA
ATCCATCTGTACGATCTGGGTACTGGCAATCAGGTGAAGATCCCGAGTGAGGTGATGATCCCTGAAACCCGCGAATTTGA
ATTTGCCAATCTGGGATTCATTCCTTTGTCCTATTACCGCAATCGTGACTATGCGTGCTTCTTCTCGGCTAACTCGACCC
AGAAACCGGCACTCTATGATACAGCGGATGCAACGGCTAACAGCCGTATCAATGCCCGTCTGCCATACATTTTCCTGCTG
TCGCGCATTGCGCACTATCTGAAGCTTATCCAGCGCGAAAACATCGGTACGACGAAAGACCGTCGTCTACTGGAGCTGGA
GTTGAACACCTGGGTGCGCAGTCTGGTAACGGAAATGAGCGATCCGGGTGATGAGCTACAGGCTTCTCACCCACTGCGTG
ACGCGAAAGTGACAGTGGAAGATATTGAGGATAACCCGGGTTTTTTCCGCGTGAAACTGTACGCGATCCCGCACTTCCAG
GTAGAGGGCATGGACGTCAACCTGTCACTGGTTTCTCAGATGCCCAAGGCGAAATCATAA

Protein sequence :
MLERPVAGGVYASLFEKINLNPVSELSALDIWQDAQAMSDATADERLTAGMQVFIECLTKSGSKVEKLDKHLIDHHIAAL
DDQISRQLDAVMHHEDFQAVESLWRGVKSLVDKTDFRQNVKIELLDMSKEDLRQDFEDSPEIIQSGLYKHTYIDEYDTPG
GEPIAALISAYEFDASAQDVALLRNISKVSAAAHMPFIGSAGPTFFLKDSMEEVAAIKDIGNYFDRAEYIKWKSFRETDD
SRYIGLVMPRVLGRLPYGPDTVPVRSFNYVEEVKGPDHDKYLWTNASFAFASNMVRSFINNGWCVQIRGPQAGGAVQDLP
IHLYDLGTGNQVKIPSEVMIPETREFEFANLGFIPLSYYRNRDYACFFSANSTQKPALYDTADATANSRINARLPYIFLL
SRIAHYLKLIQRENIGTTKDRRLLELELNTWVRSLVTEMSDPGDELQASHPLRDAKVTVEDIEDNPGFFRVKLYAIPHFQ
VEGMDVNLSLVSQMPKAKS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aec18 YP_851426.1 hypothetical protein Not tested PAI II APEC-O1 Protein 1e-101 45
aec18 AAQ96712.1 Aec18 Not tested AGI-1 Protein 8e-102 45
HH0247 NP_859778.1 hypothetical protein Not tested HHGI1 Protein 9e-98 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PAJ_p0136 YP_005941101.1 hypothetical protein VFG2475 Protein 1e-110 47
PAJ_p0136 YP_005941101.1 hypothetical protein VFG2093 Protein 1e-108 46
PAJ_p0136 YP_005941101.1 hypothetical protein VFG2070 Protein 3e-88 45