Gene Information

Name : PSTAA_0851 (PSTAA_0851)
Accession : YP_005937503.1
Strain : Pseudomonas stutzeri DSM 4166
Genome accession: NC_017532
Putative virulence/resistance : Virulence
Product : DNA-binding response regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 925572 - 926231 bp
Length : 660 bp
Strand : -
Note : -

DNA sequence :
ATGCGCATTCTGCTGGTGGAAGACGATCGCGCCCTTGGCGAGGGCATCCGCACCGCGCTCAAGCCGGAGGGCTATACGGT
GGACTGGCTGCAGGACGGCGCCAGTGCGCTGCACGCGCTGAACCATGAAAGCTTCGAGCTGGTCATCCTCGACCTCGGCC
TGCCGCGCCTGGACGGGCTGGAGCTGCTCAAGCGCCTGCGTGCTGCCGGCAATCCGGTGCCGGTGCTGGTGCTCACCGCG
CGCGATGCCACCAGCGACCGCATCGCCGGGCTGGACGCCGGCGCCGACGACTACCTGGTCAAGCCGTTCGACGTCGCCGA
ACTCAAGGCCCGCCTGCGTGCCCTGCTCCGGCGCAGCTTCAATCGACCGGAACCGGTGCTGGAATACCGTGGCATCCTGC
TCGACCCGGTCAACCAGCAGGTCAGTTACCAGGGCACGCCGATCAACCTGCCGCGCAAGGAGTTCGTCCTGCTCCACGAG
CTGCTCGCCCAGCCCGGTCGCGTGCTGACCCGCGATCGCCTGCAGCAGGTACTCTACGGCTGGGACGAGGACGTCGAGAG
CAATGCGCTGGAGGTGCACATCCACCACCTGCGCAAGAAGTTCTTTCCCGAGCTGATCCGCACCGTGCGCGGCGTCGGCT
ATCTGGTGGACAAATGCTGA

Protein sequence :
MRILLVEDDRALGEGIRTALKPEGYTVDWLQDGASALHALNHESFELVILDLGLPRLDGLELLKRLRAAGNPVPVLVLTA
RDATSDRIAGLDAGADDYLVKPFDVAELKARLRALLRRSFNRPEPVLEYRGILLDPVNQQVSYQGTPINLPRKEFVLLHE
LLAQPGRVLTRDRLQQVLYGWDEDVESNALEVHIHHLRKKFFPELIRTVRGVGYLVDKC

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 7e-27 47
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 2e-22 43
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 1e-21 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PSTAA_0851 YP_005937503.1 DNA-binding response regulator BAC0487 Protein 1e-25 48
PSTAA_0851 YP_005937503.1 DNA-binding response regulator BAC0197 Protein 8e-25 43
PSTAA_0851 YP_005937503.1 DNA-binding response regulator BAC0638 Protein 9e-17 42
PSTAA_0851 YP_005937503.1 DNA-binding response regulator BAC0083 Protein 9e-22 41
PSTAA_0851 YP_005937503.1 DNA-binding response regulator BAC0308 Protein 3e-22 41
PSTAA_0851 YP_005937503.1 DNA-binding response regulator BAC0288 Protein 3e-20 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PSTAA_0851 YP_005937503.1 DNA-binding response regulator VFG1390 Protein 3e-28 48
PSTAA_0851 YP_005937503.1 DNA-binding response regulator VFG0473 Protein 9e-27 47
PSTAA_0851 YP_005937503.1 DNA-binding response regulator VFG0596 Protein 8e-23 43