Gene Information

Name : PSTAA_0048 (PSTAA_0048)
Accession : YP_005936712.1
Strain : Pseudomonas stutzeri DSM 4166
Genome accession: NC_017532
Putative virulence/resistance : Virulence
Product : aldehyde dehydrogenase family protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 51848 - 53341 bp
Length : 1494 bp
Strand : +
Note : -

DNA sequence :
ATGCCCAGCCTGACCTTCGCCGATTGGCAACAGCGTGCCCGTGACCTGCGTATCGAAGGTCGCGCCTTTATCCAGGGTGA
GTATTGCGCCGCGGCGCAGGGTGGCCAGTTCGACTGCATCAGCCCGGTGGACGGGCGGGTGCTGGCGCAGGTCGCCAGCT
GCGACCTGGCCGATGCCGAGCGTGCGGTGGCCAGCGCACGCGCCGCATTCGAGGCAGGCAGCTGGGCGAAGCTGGCGCCG
GCCAAGCGCAAGGCGGTGCTGATTCGCTTCGCCGATCTGCTGGAAGCGAACCGCGAGGAGCTGGCCCTGCTGGAGACCCT
CGACATGGGCAAGCCGATCGGCGACTCGCTGACGGTGGACATCCCCGGTGCGGCGCGGGCGCTGCGCTGGAGCGGCGAGG
CGATCGACAAGATCTACGACGAGGTAGCGGCCACGCCCCACGACCAGCTGGGCCTGGTCACCCGCGAGCCGGTCGGCGTG
GTGGCGGCCATCGTGCCGTGGAATTTCCCGCTGATGATGGCCTGCTGGAAGCTCGGCCCGGCACTGGCCACAGGCAACTC
GGTGGTGCTCAAGCCGTCCGAGAAGTCGCCGCTGACCGCCATCCGCATCGCCCAGCTGGCGATCGACGCCGGCATTCCGG
CCGGCGTGCTCAATGTCCTGCCAGGCTACGGGCACACCGTCGGCAAGGCGCTGGCGCTGCACATGGACGTCGACACGCTG
GTCTTTACCGGCTCCACTCGGGTGGCCAAGCAGCTGATGATCTACGCCGGCGAGTCGAACATGAAGCGTGTCTGGCTGGA
GGCGGGCGGCAAGAGCCCGAACATCGTTTTCGCCGATGCGCCCGACCTGCAGGCCGCTGCCCAGGCGGCGGCGGGTGCCA
TCGCCTTCAATCAGGGCGAGGTCTGCACTGCCGGTTCGCGGCTGCTGGTGGAGCGTTCGATCAAGGAGCGCTTCCTGCCC
ATGGTGGTGGAGGCGCTCAAGGGCTGGAAGCCGGGCAACCCGCTGGACCCTTCGACCAACGTCGGCGCCCTGGTGGACAC
CCAGCAGCTCAACACCGTGCTCGGCTACATCGACGCCGGGCGTCAGGCCGGCGCGCAGGTGCTGATCGGCGGCCAGCGGA
CGCTGGAGGAAACCGGCGGGCTGTACGTCGAGCCGACCATCTTCGATGGCGTCGATAATGCGATGAAGATCGCCCAAGAG
GAAATCTTTGGCCCGGTGCTCTCGGTGATCAGCTTCGACAGCGCCGAGGAAGCGGTGGTGATCGCCAACGACACGCCCTA
CGGCCTCGCTGCCGCGGTGTGGACCGCCGACCTGTCCAAGGCGCACCGCACCGCACGGGCGCTGCGCGCCGGCAGTGTGT
GGGTCAACCAGTACGACGGCGGCGACATGACCGCGCCGTTCGGCGGCTTCAAGCAGTCCGGCAACGGTCGTGACAAGTCG
CTGCATGCCTTCGACAAGTACACCGAGCTCAAGGCGACCTGGATTCAGCTCTGA

Protein sequence :
MPSLTFADWQQRARDLRIEGRAFIQGEYCAAAQGGQFDCISPVDGRVLAQVASCDLADAERAVASARAAFEAGSWAKLAP
AKRKAVLIRFADLLEANREELALLETLDMGKPIGDSLTVDIPGAARALRWSGEAIDKIYDEVAATPHDQLGLVTREPVGV
VAAIVPWNFPLMMACWKLGPALATGNSVVLKPSEKSPLTAIRIAQLAIDAGIPAGVLNVLPGYGHTVGKALALHMDVDTL
VFTGSTRVAKQLMIYAGESNMKRVWLEAGGKSPNIVFADAPDLQAAAQAAAGAIAFNQGEVCTAGSRLLVERSIKERFLP
MVVEALKGWKPGNPLDPSTNVGALVDTQQLNTVLGYIDAGRQAGAQVLIGGQRTLEETGGLYVEPTIFDGVDNAMKIAQE
EIFGPVLSVISFDSAEEAVVIANDTPYGLAAAVWTADLSKAHRTARALRAGSVWVNQYDGGDMTAPFGGFKQSGNGRDKS
LHAFDKYTELKATWIQL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF SG19 AAN62241.1 putative aldehyde dehydrogenase Not tested PAGI-3(SG) Protein 5e-113 58
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 2e-68 43
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 2e-68 43
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 2e-68 43
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 2e-68 43
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 2e-68 43
hpaE AAO17179.1 HpaE Not tested tcd island Protein 9e-59 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PSTAA_0048 YP_005936712.1 aldehyde dehydrogenase family protein VFG0082 Protein 8e-69 43