Gene Information

Name : PSTAA_0417 (PSTAA_0417)
Accession : YP_005937079.1
Strain : Pseudomonas stutzeri DSM 4166
Genome accession: NC_017532
Putative virulence/resistance : Virulence
Product : mutant NtrC-like activator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 469676 - 471064 bp
Length : 1389 bp
Strand : +
Note : -

DNA sequence : 
ATGACTGACGCGGTGCAGGAGCGTGTGCTGCTGGTCGAGGACGATGACAGCCTGCGCCAGCTGCTAGTGGAGGAGCTGGA
GGATCGCGGGCTGCAGGTGCGCGCGCTGGCCAGCGCCGAGGAGGCGGTGGGTTCCCTGGAAAGCTGGGAGCCGGCGTTGG
TGGTCAGCGACCTGCGCCTGCCCGGCGCTGACGGCATGGCGCTGCTGCGGCGGGTGAAGAGCATGCAGGCGGCACCTGCG
TTTCTGGTGATCACCGCGTTCGGCAGCATTCAGCAGGCGGTGGCGGCGCTCAAGGAAGGCGCCGACGAATTTCTCACCAA
GCCGCTGGACCTCGAGCACTTCGCTCTGGCGGTCGGCCGCGCGCTGGAGACGCGGCGCCTGCGCGACGAAGTGCGGCGCT
TTCAGCAGCTGCTCAGCGATGATCGCTTCCACGGCATGCTCGGACGCAGCCGGGTGATGCGCGGGCTGTTCGATCAGATC
CGCCAGCTCGCCCGTGCCGAAGGGCCGGTGCTGGTGATCGGCGAGAGCGGCACCGGCAAGGAACTGGTGGCCAGGGCGGT
GCATGCCGAGAGCGAGCGCGCCGGCGGCCCGTTCCTGGCCATCAACTGCGCCGGGTTGCCGGCCGAGCTCCTGGAAAGCG
AGTTCTTCGGCCATGTCGCCGGTGCCTTCACCGGCGCCAATCGCGCGCACAAGGGGCTGTTCCAACAGGCCGACGGCGGT
ACGCTCTTTCTCGACGAGATCGGCGAGATGCCGCTGCCGCTGCAGGCCAAGCTCCTGCGCGTGCTGCAGGAAGGCACGAT
CCGCCCGGTGGGTGCCGAGCGCGAACTCAGCGTGGACGTGCGCATCATCGCCGCCAGCAATCGCCCGCTGGAAACCGAGG
CCGGGCGCGAGGCGTTCCGCGAAGACCTGTTCTTCCGTCTGGAAACCTTCATTCTGCAGGTGCCGCCGTTGCGTGATCGC
GAGGAGGATCTCGAATTGCTGGCCGCCGGCTTCGTCGCCCACTTTGCCGCGCGCGGCGGACGGCCGGTGCGCGGCATCGC
GCCGGCGGCGCTGGAGCAGCTACGCCGCTATCCGTTCCCGGGCAACGTGCGCGAGCTGCAGAACGCCATCGAGCGGGCAG
TGACCTTCTGCCACGGGCGCAGCATCGAGCTGGAGCACCTGCCCAGCCGCATCGCCAGCTACCGTGACGACAAGGCCCGC
AGCGCCGGGGCCGAGCTGCTCGCCGAGCTCAGCGATGGCCCGTTGCTGCCGACCCTGGAAGAGCTGGAACTGCGTTATAT
CGAGCACGTGCTCAAGCTGGTGGACGGCAACAAGCGCCGCGCGGCGGCCTTGCTCGGCATCGGACGGCGCACGCTGTACA
GACGCCTCGGCGAGCGCGAGGAAGGCTGA

Protein sequence : 
MTDAVQERVLLVEDDDSLRQLLVEELEDRGLQVRALASAEEAVGSLESWEPALVVSDLRLPGADGMALLRRVKSMQAAPA
FLVITAFGSIQQAVAALKEGADEFLTKPLDLEHFALAVGRALETRRLRDEVRRFQQLLSDDRFHGMLGRSRVMRGLFDQI
RQLARAEGPVLVIGESGTGKELVARAVHAESERAGGPFLAINCAGLPAELLESEFFGHVAGAFTGANRAHKGLFQQADGG
TLFLDEIGEMPLPLQAKLLRVLQEGTIRPVGAERELSVDVRIIAASNRPLETEAGREAFREDLFFRLETFILQVPPLRDR
EEDLELLAAGFVAHFAARGGRPVRGIAPAALEQLRRYPFPGNVRELQNAIERAVTFCHGRSIELEHLPSRIASYRDDKAR
SAGAELLAELSDGPLLPTLEELELRYIEHVLKLVDGNKRRAAALLGIGRRTLYRRLGEREEG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00300 YP_008207765.1 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Not tested AbaR25 Protein 5e-59 41
BJAB0868_00304 YP_008211630.1 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Not tested AbaR26 Protein 5e-59 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PSTAA_0417 YP_005937079.1 mutant NtrC-like activator BAC0467 Protein 3e-66 44
PSTAA_0417 YP_005937079.1 mutant NtrC-like activator BAC0089 Protein 4e-73 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PSTAA_0417 YP_005937079.1 mutant NtrC-like activator VFG1214 Protein 6e-70 44
PSTAA_0417 YP_005937079.1 mutant NtrC-like activator VFG0116 Protein 7e-60 42
PSTAA_0417 YP_005937079.1 mutant NtrC-like activator VFG1249 Protein 2e-54 42