Gene Information

Name : czrR-1 (PSTAA_4039)
Accession : YP_005940636.1
Strain : Pseudomonas stutzeri DSM 4166
Genome accession: NC_017532
Putative virulence/resistance : Virulence
Product : DNA-binding response regulator CzrR
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4341428 - 4342087 bp
Length : 660 bp
Strand : +
Note : -

DNA sequence : 
GTGGAAGACGAAGCCAAAACTGCCGAATATCTTCAGCAAGGGCTTACCGAAAGTGGCTATATCGTTGACCGGGCAAGTAA
TGGTGTCGATGCGCTGCACCTGTTCCAGCACAACACCTACGGCCTGGTCATCCTGGATGTGAACCTGCCCAAGGTGGACG
GCTGGGACGTGCTCGACACGATCCGCAAGACCAGTCGGGTTCGCATCATCATGCTGACCGGTCGTGGCCGCCTGCACGAC
AAGCTGAAGGGCCTGGACGGCGGCGCCGACGACTATCTAGTGAAGCCGTTCGAGTTTCCGGAACTGCTTGCCCGCATCCG
CTCGCTGCAGCGGCGTGGCGACAAGGTGGTGGACCACCCGACCTTGCGGGTCGCAGACCTTGAGCTGGATCCGGGTCGCC
ACCGCGCGTTCCGGGGTGACCTGCGCGTCGAGCTGACTACCAAGGAATTCGCCCTGTTGCGCCTGCTCATGAGCCACCCA
GGGGAAGCCCTGACCCGCTCGCAGATCATTTCCCTGGTCTGGGACATGAACTTCGACTGCGATACCAACGTGATCGACGT
GGCGATCCGGCGCCTGCGCGCCAAGATCGACGATCCGTTCGAGAACAAACTTATCCACACCCTGCGCGGTGTGGGCTATG
TGATCGAGGAGCGTTCATGA

Protein sequence : 
MEDEAKTAEYLQQGLTESGYIVDRASNGVDALHLFQHNTYGLVILDVNLPKVDGWDVLDTIRKTSRVRIIMLTGRGRLHD
KLKGLDGGADDYLVKPFEFPELLARIRSLQRRGDKVVDHPTLRVADLELDPGRHRAFRGDLRVELTTKEFALLRLLMSHP
GEALTRSQIISLVWDMNFDCDTNVIDVAIRRLRAKIDDPFENKLIHTLRGVGYVIEERS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 2e-43 50
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 1e-42 49

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
czrR-1 YP_005940636.1 DNA-binding response regulator CzrR BAC0083 Protein 3e-48 56
czrR-1 YP_005940636.1 DNA-binding response regulator CzrR BAC0197 Protein 4e-50 56
czrR-1 YP_005940636.1 DNA-binding response regulator CzrR BAC0125 Protein 4e-50 55
czrR-1 YP_005940636.1 DNA-binding response regulator CzrR BAC0638 Protein 4e-43 55
czrR-1 YP_005940636.1 DNA-binding response regulator CzrR BAC0111 Protein 5e-48 53
czrR-1 YP_005940636.1 DNA-binding response regulator CzrR BAC0308 Protein 6e-43 52
czrR-1 YP_005940636.1 DNA-binding response regulator CzrR BAC0347 Protein 2e-43 49
czrR-1 YP_005940636.1 DNA-binding response regulator CzrR CP000034.1.gene3834. Protein 2e-13 41
czrR-1 YP_005940636.1 DNA-binding response regulator CzrR NC_002695.1.915041.p Protein 2e-13 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
czrR-1 YP_005940636.1 DNA-binding response regulator CzrR VFG0596 Protein 7e-44 50
czrR-1 YP_005940636.1 DNA-binding response regulator CzrR VFG1390 Protein 4e-28 41
czrR-1 YP_005940636.1 DNA-binding response regulator CzrR VFG1389 Protein 2e-25 41