Gene Information

Name : pilR (PSTAA_3740)
Accession : YP_005940339.1
Strain : Pseudomonas stutzeri DSM 4166
Genome accession: NC_017532
Putative virulence/resistance : Virulence
Product : two-component response regulator PilR
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3995710 - 3997101 bp
Length : 1392 bp
Strand : +
Note : -

DNA sequence : 
ATGCTCGCCAGCCGCCCGGAAGGCGACCCCCGCTTCAGGAACCAGAGCAAGACCATGACCGCGCGCCAGAAAGCCCTGAT
CATCGACGACGAGCCGGACATCCGCGAGCTGCTGGAGATCACCCTCGGCCGCATGAAGCTCGATACCCGCAGCGCACGCA
ACCTAAAGGAGGCGCGCGAGCTGCTGGCACGCGAGCACTACGACCTGTGCCTGACCGATATGCGCCTGCCCGACGGCAGT
GGCCTTGAGCTGGTCCAGCACATCCAGCAACAGTACCCGCAACTGCCCGTGGCGATGATCACCGCCTATGGCAGCCTGGA
TACCGCCATCGGTGCACTCAAGGCCGGTGCGTTCGACTTTCTCACCAAACCGGTGGACCTGAACCGCCTGCGCGAGCTGG
TCAGCACCGCCCTGCGCCTGCGCGCGCCCGCAGCCGAGGCGCCGGTGGACAGTCGCCTGCTGGGCAGCTCGCCGCCGATG
AAAACCTTGCGCAAGCAGATCGGCAAGCTCGCCCGCAGCCAGGCACCCGTCTACATCAGCGGCGAGTCGGGCAGCGGCAA
GGAACTGGTGGCACGCCTGATTCACGAGCAGGGCCCGCGCAGCGAAAAGCCATTCGTGCCGGTCAACTGCGGTGCCATTC
CGTCGGAGCTGATGGAAAGCGAGTTCTTCGGCCACAAGAAGGGCAGCTTCAGCGGCGCCATCGAGGACAAGCCCGGCCTG
TTCCAGGCCGCCAACGGTGGCACGCTGTTTCTCGACGAGGTGGCGGACCTGCCGCTGCCGATGCAGGTCAAGCTGCTGCG
CGCCATCCAGGAAAAGGCCGTGCGTGCCGTTGGCGGTGCGCAGGAAGTGATGGTCGATGTACGCATCCTCTGCGCCACCC
ACAAGGATCTCGCCAGCGAGGTCGCCGCAGGCCGTTTTCGCCAGGATCTCTACTACCGCCTGAATGTCATCGAACTGCGT
GTACCGCCACTACGCGAACGCCGGGAAGACATCGGCCTGCTCGCCGATGTCATGCTGCGCCGTCTGGCGCAGGAATGCGG
CGAGGCCACGGCCCGCCTGCATCCCGATGCCCTGGCCAAGCTGGAGAACTATCGCTTTCCGGGCAACGTCCGCGAGCTGG
AGAACATGCTCGAACGCGCCTACACCCTGTGCGAAGGCGACGAGATCAAGGCTGGCGACCTGCGCCTGGCGGATAGCCCC
GGCCTGCCGGAAAACGGCGAAGCCAGCCTGGCGCAGATCGACAACCTGGAGGACCACCTGGAGGAGATCGAGCGCAAGCT
GATCATGCAGGCCCTCGAAGAAACACGCTGGAACCGCACCGCGGCCGCCCAACGACTGGGGCTGACCTTCCGCTCGATGC
GCTACCGTCTGAAGAAACTCGGACTGGACTGA

Protein sequence : 
MLASRPEGDPRFRNQSKTMTARQKALIIDDEPDIRELLEITLGRMKLDTRSARNLKEARELLAREHYDLCLTDMRLPDGS
GLELVQHIQQQYPQLPVAMITAYGSLDTAIGALKAGAFDFLTKPVDLNRLRELVSTALRLRAPAAEAPVDSRLLGSSPPM
KTLRKQIGKLARSQAPVYISGESGSGKELVARLIHEQGPRSEKPFVPVNCGAIPSELMESEFFGHKKGSFSGAIEDKPGL
FQAANGGTLFLDEVADLPLPMQVKLLRAIQEKAVRAVGGAQEVMVDVRILCATHKDLASEVAAGRFRQDLYYRLNVIELR
VPPLRERREDIGLLADVMLRRLAQECGEATARLHPDALAKLENYRFPGNVRELENMLERAYTLCEGDEIKAGDLRLADSP
GLPENGEASLAQIDNLEDHLEEIERKLIMQALEETRWNRTAAAQRLGLTFRSMRYRLKKLGLD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00300 YP_008207765.1 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Not tested AbaR25 Protein 2e-98 50
BJAB0868_00304 YP_008211630.1 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Not tested AbaR26 Protein 2e-98 50

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
pilR YP_005940339.1 two-component response regulator PilR BAC0467 Protein 9e-71 44
pilR YP_005940339.1 two-component response regulator PilR BAC0089 Protein 2e-71 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
pilR YP_005940339.1 two-component response regulator PilR VFG1214 Protein 6e-169 85