Gene Information

Name : PSTAA_3565 (PSTAA_3565)
Accession : YP_005940167.1
Strain : Pseudomonas stutzeri DSM 4166
Genome accession: NC_017532
Putative virulence/resistance : Unknown
Product : putative transposase subunit B
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3805105 - 3805950 bp
Length : 846 bp
Strand : +
Note : -

DNA sequence :
GTGTTGCAGATCGCCCCGTCCGGTTACCGCAGGCACGTGGCTCAACAGCGCAACCCGGCACTGCGCTGTTGTCGTGCTCA
GCGCGATGACGCATTGACCCTGGAAATCCAGCGAGTGTGGGATGCCAATATGCAGTGCTATGGCGCGGTGAAGGTCTGGA
AGCAGCTGCGGCGAGAAGGCATCGAGGTCGCCAGATGCACGGTGGAGCGGTTAATGCGTCGGGCCGGATTGCAGGGCATT
AGACGTGGCCAGATCGTGCAGACAACGGTGGCCGGCGACAAGGCCCTTTGCCCGCTGGATCGTGTCCAACGCCAGTTCCA
TGCCGACCGCCCGAACCAGTTGTGGGTGTCGGACTTCACCTATGTATCGACCTGGCAGGGCTGGCTGTACGTGGCGTTCG
TGATCGACGTCTTTGCACGGCGGATCGTCGGCTGGCGAGTCAGTACCAGCATGAAGACAGACTTCGTACTGGATGCCCTG
GAGCAGGCCCTGTACGCCCGCCAGCCACACCGTACCGGTGGTCTGATCCATCACAGCGACCGTGGAAGCCAGTACGTCTC
GATCCGCTATACCGAACGGCTGGCAGAGGCCGGCATTGAGCCTTCGGTTGGCAGCAAGGGAGACAGCTACGACAACGCCT
TGGCCGAAACCATCAACGGGTTGTACAAGGCCGAGCTGATTTACCGTCAGTCATGGAAGAGCCGCGAAGCCGTCGAAATG
GCGACTTTGAAATGGGTGCACTGGTACAACCACCAACGCCTGCTGAGCTCAATCGGATATATCCCGCCTGCGGAGGCTGA
GGCAAACTTCCACCAGCAACAAGCAGGTCAGGCCATGGCGGCCTGA

Protein sequence :
MLQIAPSGYRRHVAQQRNPALRCCRAQRDDALTLEIQRVWDANMQCYGAVKVWKQLRREGIEVARCTVERLMRRAGLQGI
RRGQIVQTTVAGDKALCPLDRVQRQFHADRPNQLWVSDFTYVSTWQGWLYVAFVIDVFARRIVGWRVSTSMKTDFVLDAL
EQALYARQPHRTGGLIHHSDRGSQYVSIRYTERLAEAGIEPSVGSKGDSYDNALAETINGLYKAELIYRQSWKSREAVEM
ATLKWVHWYNHQRLLSSIGYIPPAEAEANFHQQQAGQAMAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Z4334 NP_289559.1 IS629 transposase Not tested OI-122 Protein 2e-61 65
S4063 NP_839232.1 IS629 orfB Not tested SHI-2 Protein 5e-61 64
unnamed AAL67406.1 putative transposase Not tested PAI II CFT073 Protein 8e-69 64
APECO1_3499 YP_854312.1 transposase for IS629 Not tested PAI I APEC-O1 Protein 1e-74 64
ORF_34 AAZ04444.1 putative IS629 transposase Not tested PAI I APEC-O1 Protein 9e-75 64
tnpC AAD44736.1 TnpC Not tested SHI-2 Protein 2e-57 63
IS629 CAI43821.1 transposase for IS629 Not tested LEE Protein 5e-71 63
IS629 CAI43909.1 transposase for IS629 1 Not tested LEE Protein 5e-71 63
ECO103_3585 YP_003223443.1 IS629 transposase OrfB Not tested LEE Protein 3e-71 63
Z1198 NP_286733.1 transposase Not tested TAI Protein 5e-73 63
Z1638 NP_287141.1 transposase Not tested TAI Protein 5e-73 63
c5178 NP_757026.1 transposase IS629 Not tested PAI II CFT073 Protein 2e-73 63
Z1660 NP_287162.1 transposase for IS629 Not tested TAI Protein 1e-73 63
IS629 CAI43840.1 transposase for IS629 Not tested LEE Protein 7e-71 63
Z1221 NP_286756.1 transposase Not tested TAI Protein 1e-73 63
IS629 CAC37926.1 transposase for IS629 Not tested LEE Protein 5e-71 63
ECO111_3776 YP_003236111.1 putative IS629 transposase OrfB Not tested LEE Protein 7e-74 63
c5213 NP_757061.1 transposase IS629 Not tested PAI II CFT073 Protein 6e-74 63
ECO111_3721 YP_003236061.1 putative IS629 transposase OrfB Not tested LEE Protein 7e-74 63
c5167 NP_757015.1 transposase IS629 Not tested PAI II CFT073 Protein 2e-49 63
unnamed AAL67398.1 putative transposase Not tested PAI II CFT073 Protein 2e-73 62
unnamed CAD42083.1 hypothetical protein Not tested PAI II 536 Protein 3e-70 62
tnp7109-25 YP_001800853.1 transposase for insertion sequence Not tested Not named Protein 2e-51 50
CDCE8392_1958 YP_005134489.1 transposase-like protein Not tested Not named Protein 1e-32 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PSTAA_3565 YP_005940167.1 putative transposase subunit B VFG1602 Protein 2e-70 62