Gene Information

Name : PSTAA_3564 (PSTAA_3564)
Accession : YP_005940166.1
Strain : Pseudomonas stutzeri DSM 4166
Genome accession: NC_017532
Putative virulence/resistance : Unknown
Product : putative transposase subunit A
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3804773 - 3805051 bp
Length : 279 bp
Strand : +
Note : -

DNA sequence :
GTGCGCATGGTTCTGGAACACCTGAACGACTATCCGTCCGAGTGGGCAGCCATTGAGGCCATCGCTCCGAAGATTGGCTG
TGCCGCGCAAACCCTGCATGGCTGGATTCGTCGCCAGCAGACCGATGCGGGGCAGCGCCCCGGTCAGACCAGTGAAGAGC
GCGAGCGCATCAGAGCCCTAGAGCGCGAAAACCGCGAACTGCGTAAGGCAAACGAGATATTGCGCCTGGCCAGTGCGTAT
TTTGCCCAGGCGGAGCTCGACCGCCGCACCAAGTCCTGA

Protein sequence :
MRMVLEHLNDYPSEWAAIEAIAPKIGCAAQTLHGWIRRQQTDAGQRPGQTSEERERIRALERENRELRKANEILRLASAY
FAQAELDRRTKS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ECO111_3720 YP_003236060.1 putative IS629 transposase OrfA Not tested LEE Protein 9e-11 60
ECO111_3775 YP_003236110.1 putative IS629 transposase OrfA Not tested LEE Protein 9e-11 60
Z4335 NP_289560.1 hypothetical protein Not tested OI-122 Protein 9e-11 60
IS629 CAC37925.1 hypothetical protein Not tested LEE Protein 6e-12 59
IS629 CAI43820.1 hypothetical protein Not tested LEE Protein 6e-12 59
IS629 CAI43841.1 hypothetical protein Not tested LEE Protein 6e-12 59
IS629 CAI43908.1 hypothetical protein 1 Not tested LEE Protein 6e-12 59
Z1199 NP_286734.1 hypothetical protein Not tested TAI Protein 1e-11 59
Z1222 NP_286757.1 hypothetical protein Not tested TAI Protein 1e-11 59
Z1639 NP_287142.1 hypothetical protein Not tested TAI Protein 1e-11 59
Z1661 NP_287163.1 hypothetical protein Not tested TAI Protein 1e-11 59
ECO103_3584 YP_003223442.1 IS629 transposase OrfA Not tested LEE Protein 8e-12 59
unnamed CAD42084.1 hypothetical protein Not tested PAI II 536 Protein 8e-09 57
ORF_36 AAZ04445.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 9e-09 56
APECO1_3498 YP_854313.1 transposase; OrfA protein of insertion sequence IS629 Not tested PAI I APEC-O1 Protein 1e-08 56
r13 AAC61722.1 R13 Not tested PAI I CFT073 Protein 3e-08 53
ECUMN_3344 YP_002414020.1 transposase ORF A, IS629 Not tested Not named Protein 4e-08 53
unnamed AAL67404.1 R13-like protein Not tested PAI II CFT073 Protein 3e-08 53
c5168 NP_757016.1 hypothetical protein Not tested PAI II CFT073 Protein 3e-09 53
unnamed AAF09023.1 unknown Not tested SHI-O Protein 2e-09 53
c5214 NP_757062.1 hypothetical protein Not tested PAI II CFT073 Protein 3e-09 53
tnpE AAD44738.1 TnpE Not tested SHI-2 Protein 2e-09 53
S3184 NP_838467.1 IS629 orfA Not tested SHI-1 Protein 3e-09 53
unnamed AAL67399.1 TnpE-like protein Not tested PAI II CFT073 Protein 2e-09 53
SF2979 NP_708753.1 IS629 ORF1 Not tested SHI-1 Protein 3e-09 53
c3596 NP_755471.1 hypothetical protein Not tested PAI I CFT073 Protein 4e-08 53
unnamed ADD91740.1 hypothetical protein Not tested PAI-I AL862 Protein 2e-09 53
c5177 NP_757025.1 hypothetical protein Not tested PAI II CFT073 Protein 4e-08 53
S4062 NP_839231.1 IS629 orfA Not tested SHI-2 Protein 3e-08 52
SF3706 NP_709445.1 IS629 ORF1 Not tested SHI-2 Protein 2e-09 52

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PSTAA_3564 YP_005940166.1 putative transposase subunit A VFG1603 Protein 3e-09 57
PSTAA_3564 YP_005940166.1 putative transposase subunit A VFG1717 Protein 1e-08 53
PSTAA_3564 YP_005940166.1 putative transposase subunit A VFG0643 Protein 7e-10 53
PSTAA_3564 YP_005940166.1 putative transposase subunit A VFG0606 Protein 5e-10 52