Gene Information

Name : PSTAA_3533 (PSTAA_3533)
Accession : YP_005940135.1
Strain : Pseudomonas stutzeri DSM 4166
Genome accession: NC_017532
Putative virulence/resistance : Unknown
Product : IS3 family transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3755028 - 3755861 bp
Length : 834 bp
Strand : -
Note : -

DNA sequence :
GTGCGGCGTCTCTGCCAGACCCTCAAGGTGCATCCCAGCGGTTACTACGCCTGGCTGGTCGAGCCGAAATCGGTACGCGC
CAAGGAAGATCAACGCCTGCTCGGATTGATCAAGCATGCCTGGTTGGAAAGCGGCGGGGTCTACGGCTACCGCAAGATCC
ACGACGACCTGCGTGAGCTGGGCGAGCCCTGTGGCCGGCACCGTGTGGCTCGCCTGATGAGGAGAGAGGGGCTGCGCTCG
CAGACCGGTTATCGCCGGCGCCCCGGGTACTACGGTGGCAAGCCGCCAGTGGCCTCGCCCAACCGTCTAGAGCGGCAGTT
CAATGTCAGTGAACCGAACAAGGTCTGGGTCACCGACATCACTTACATCCGCACGTATGAGGGCTGGTTGTACTTGGCAG
TGGTTCTGGATCTGTTTTCTCGCCAAGTGATCGGCTGGTCGATGAAGCCTCGGATGTGCAGCGACCTGGCCATTGATGCG
TTGCTGATGGCTGTGTGGCGGCGCAAGCCCAAGCAGGAAGTGATGATCCATTCCGACCAGGGCAGCCAGTTCAGCAGCTC
GGACTGGCAGAGTTTCCTCAAGGCCAACAACCTGATCAGCAGCATGAGTCGACGCGGTAACTGTCACGACAACGCGGTCG
CGGAAAGCTTTTTCCAGTTGCTGAAGCGGGAACGCATCCGACGGAAAACCTACGGAACCCGCGAAGAAGCCCGCAGTGAT
GTGTTCGATTACATCGAGATGTTCTATAACCCCAAGCGCCGGCACAGCAGCGCTATGCAGCTATCGCCAGTGGAGTTTGA
AAAGCGCTATTTCCAGAGCTTGGAGAGTGTCTAG

Protein sequence :
MRRLCQTLKVHPSGYYAWLVEPKSVRAKEDQRLLGLIKHAWLESGGVYGYRKIHDDLRELGEPCGRHRVARLMRREGLRS
QTGYRRRPGYYGGKPPVASPNRLERQFNVSEPNKVWVTDITYIRTYEGWLYLAVVLDLFSRQVIGWSMKPRMCSDLAIDA
LLMAVWRRKPKQEVMIHSDQGSQFSSSDWQSFLKANNLISSMSRRGNCHDNAVAESFFQLLKRERIRRKTYGTREEARSD
VFDYIEMFYNPKRRHSSAMQLSPVEFEKRYFQSLESV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnpB CAB61574.1 transposase B Not tested HPI Protein 3e-38 45
trp1329B CAB46576.1 IS1329 transposase B Not tested HPI Protein 3e-38 45
ECO111_3732 YP_003236068.1 putative IS3 transposase InsF Not tested LEE Protein 5e-44 45
unnamed AAL57519.1 transposase 1 Not tested LEE Protein 2e-44 45
unnamed AAL57581.1 transposase 1 Not tested LEE Protein 2e-44 45
insF CAC43414.1 transposase of insertion element IS3 Not tested PAI III 536 Protein 1e-45 44
unnamed ACU09432.1 IS911 transposase orfB Not tested LEE Protein 3e-30 42
unnamed CAI43898.1 putative transposase Not tested LEE Protein 2e-31 42
aec65 AAW51748.1 Aec65 Not tested AGI-3 Protein 2e-31 42
Z5089 NP_290241.1 transposase Not tested LEE Protein 4e-30 42
ECO111_3779 YP_003236114.1 putative IS602 transposase OrfB Not tested LEE Protein 8e-34 42
orfB AGK07032.1 IS1133 transposase; OrfB Not tested SGI1 Protein 1e-40 42
orfB AGK07090.1 IS1133 transposase; OrfB Not tested SGI1 Protein 1e-40 42
tnpA1133 ACK44540.1 TnpA Not tested SGI1 Protein 1e-40 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PSTAA_3533 YP_005940135.1 IS3 family transposase VFG1631 Protein 7e-46 44
PSTAA_3533 YP_005940135.1 IS3 family transposase VFG0785 Protein 2e-30 42