Gene Information

Name : PSTAA_3509 (PSTAA_3509)
Accession : YP_005940111.1
Strain : Pseudomonas stutzeri DSM 4166
Genome accession: NC_017532
Putative virulence/resistance : Unknown
Product : IS3 orfA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3723165 - 3723419 bp
Length : 255 bp
Strand : -
Note : -

DNA sequence :
ATGAAACAGACCCGCACCCGCCATTCCCAAGCCTACAAGGACGAAGCGCTGGCTTTGGCCGAGCGCATTGGCGTCAGCAA
GGCTGCCGAACAGCTCGGCCTGCATGCTTCCCAGCTCTACGGCTGGCGGAGCAAGAAGCACCAGACTCAGGCCGGCAGCG
AGCGCGAGCAGTCGCTGGCCGACGAGAATGCCCGACTCAAGCGGCTGTTGGCCGAGCACGCCGAGGAGCTGACTGAATCG
CCCCTAGTTTCGTAG

Protein sequence :
MKQTRTRHSQAYKDEALALAERIGVSKAAEQLGLHASQLYGWRSKKHQTQAGSEREQSLADENARLKRLLAEHAEELTES
PLVS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
S4064 NP_839234.1 IS3 orfA Not tested SHI-2 Protein 1e-14 59
SF3703 NP_709442.1 IS3 ORF1 Not tested SHI-2 Protein 1e-14 59
unnamed AAT48700.1 transposon-related Not tested PAI II 4787 Protein 6e-14 58
yis1_SHISO CAD66178.1 hypothetical protein of insertion element IS1 Not tested PAI III 536 Protein 6e-14 58
unnamed AAL57580.1 transposase 2 Not tested LEE Protein 6e-16 56
ECO111_3733 YP_003236069.1 putative IS3 transposase InsE Not tested LEE Protein 9e-16 56
unnamed AAC28568.1 YIS1_SHISO Not tested LEE Protein 6e-16 56
unnamed AAL57518.1 transposase 2 Not tested LEE Protein 6e-16 56

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PSTAA_3509 YP_005940111.1 IS3 orfA VFG0603 Protein 3e-15 59
PSTAA_3509 YP_005940111.1 IS3 orfA VFG1632 Protein 3e-14 58