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Name : topB (PSTAA_3081) Accession : YP_005939698.1 Strain : Pseudomonas stutzeri DSM 4166 Genome accession: NC_017532 Putative virulence/resistance : Unknown Product : DNA topoisomerase III Function : - COG functional category : - COG ID : - EC number : - Position : 3258688 - 3260634 bp Length : 1947 bp Strand : + Note : - DNA sequence : ATGCAACTCTATCTCTGCGAAAAGCCTTCCCAGGCCCGCGACATCGCCAAGGTGCTCGGCGCCAACCGGCGCGGCGACGG CTGCCTGCAGGGTGCCGGGGTGACGGTGACCTGGTGCATCGGCCATCTGCTGGAGACCGCCCCGCCGGACGCCTATGACC CGCGCTACAAGCGCTGGGTGCTGGCCGACCTGCCGATCGTGCCGGAGCGCTGGAAGATGCTGGTCAAGCCAAAGACCGCC AGCCAGTTCAAGGCGGTCAAGCGCCTGCTCGGTGAATGCAGCGAGCTGGTGATCGCCACCGACGCCGACCGCGAAGGCGA AATGATCGCCCGCGAGCTGGTCGAGCACTGCCGCTATCGCGGGCCGATCCGCCGGCTGTGGCTGTCGGCACTGGACGATG CCTCGATCCGCAAGGCGCTGGCCGCGCTCAAACCCGGCGCCGAGACTTTCAACCTCTACCACGCCGCCCTTGGACGCTCG CGCGCCGACTGGCTGATCGGCATGAACATGAGCCGGCTGTTCACCCTGCTCGGCCGCCAGTCCGGCTACCGCGGCGTGCT GCCGGTGGGCCGCGTGCAGACGCCGACGCTGCGTCTGGTGGTGGACCGCGACCGCAGCATCGCCGATTTCATCCCGGTGC CGTTCTGGGCCGTCGACGTGCAACTGCTCGCCGATGGCGCCGCGTTCATCGCGCAGTGGCAGGCGCCGGACGACCATTGC GATGACCAGGGCCGCTGCCTCGATCAGGCTCGTGCGCAGCAGGCGGCGGACGCCATGCGCAACGCCGCCAGCGCCCGTCT GCTGAAGCTCAAGACCGAACGTCAGCGCGAAGCGGCACCTCTGCCGTTCGATCTCGGCACGCTGCAGGAAGTCTGCTCGA AGAAGCTCGGTCTCGGCGCTCAGGAAACCCTCGACATCGCCCAGGCGCTGTACGAAACCCACAAGCTGATCACCTACCCG CGCAGCGATTGCGGCTACCTGCCACTGAGCCAGCACGGCGAAGCGCGGGCCATCGTCGCGGCGCTGACTCAAGCCGACCC GACGCTCGCGGCGCTGCAGCCGCATCTGGACCTGTCGCGCCGCTCGCGGGCGTGGAATGACGCCAAGGTCGGCGCCCACC ACGGCATCATCCCAACCGCCGCCGCGCGTGGTCTGGAACGCCTGGCCGGGCGCCCGCGTACGGTGTATGAGCTGATCCGC GCGCGCTACCTGGCGCAGTTCCTGCCCAACCACGAGTACGACCGCACCCAGGCTGACTTCGACTGCGCCGGCCAGGCGCT GCGCGCGGTGGGCAAGCGCGTCGTCGAACCGGGCTGGAAACGCGCCATGCCCGAAGCACTGGCGCCGGCACGGGGCAATC GTGAAGCAGCCGCGCCGCAAAGCCTGCCGGCGCTGCAGCAGGGCCAGGACTATGCCGTGGGCGAGATCAAGCTCAAGGAC CAGCAGACCCAGCCGCCGAAACCCTTCACCGAAGGCGACCTGATCAAGGCGATGAAGAACGTCGCCAAGCTGGTGGACGA TCCGCGGCTGAAGCAGAAACTCAAGGACACCACCGGCATCGGCACCGAGGCGACCCGCGCCGGGATCATCCAGGGCCTGC TCGACCGCGGCTATCTGGTTCGCCAGGGCAAGGCGCTGGCGGCGACACCGGCGGCGTTCAGCCTGATAGACGCCGTGCCG CGGCCGATCGCCGACCCGGGTACCACGGCGATCTGGGAACAGGCGCTGGACATGGTGCAGAGCGGCGAAATGCCGTTGGA GGAATTCGTCGCCAAGCAATCGGCATGGATGAGCAAGCTGGTCGAACGCTGCGCCGGGCTGCGCATGACGATCAGCGGTC CACCGGTGGCCGCCGGCCGCAACGGCAAACCGTGGAAGAAGAAACGCAGCGCCACGCCACGCAGAGGGAGCGGCGCTCGG ACGAGAAAACCGCGCGCGGCCGATTGA Protein sequence : MQLYLCEKPSQARDIAKVLGANRRGDGCLQGAGVTVTWCIGHLLETAPPDAYDPRYKRWVLADLPIVPERWKMLVKPKTA SQFKAVKRLLGECSELVIATDADREGEMIARELVEHCRYRGPIRRLWLSALDDASIRKALAALKPGAETFNLYHAALGRS RADWLIGMNMSRLFTLLGRQSGYRGVLPVGRVQTPTLRLVVDRDRSIADFIPVPFWAVDVQLLADGAAFIAQWQAPDDHC DDQGRCLDQARAQQAADAMRNAASARLLKLKTERQREAAPLPFDLGTLQEVCSKKLGLGAQETLDIAQALYETHKLITYP RSDCGYLPLSQHGEARAIVAALTQADPTLAALQPHLDLSRRSRAWNDAKVGAHHGIIPTAAARGLERLAGRPRTVYELIR ARYLAQFLPNHEYDRTQADFDCAGQALRAVGKRVVEPGWKRAMPEALAPARGNREAAAPQSLPALQQGQDYAVGEIKLKD QQTQPPKPFTEGDLIKAMKNVAKLVDDPRLKQKLKDTTGIGTEATRAGIIQGLLDRGYLVRQGKALAATPAAFSLIDAVP RPIADPGTTAIWEQALDMVQSGEMPLEEFVAKQSAWMSKLVERCAGLRMTISGPPVAAGRNGKPWKKKRSATPRRGSGAR TRKPRAAD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| topB | AAN62317.1 | putative DNA topoisomerase III | Not tested | PAGI-3(SG) | Protein | 6e-180 | 63 |
| pph56 | CAI36097.1 | Topoisomerase IA | Not tested | PPHGI-1 | Protein | 0.0 | 62 |
| topB | AAN62194.1 | putative DNA topoisomerase III | Not tested | PAGI-2(C) | Protein | 0.0 | 60 |
| topB | NP_458624.1 | topoisomerase B | Not tested | SPI-7 | Protein | 2e-144 | 50 |
| topB | NP_807836.1 | DNA topoisomerase III | Not tested | SPI-7 | Protein | 2e-144 | 50 |
| topB | AAF14809.1 | topoisomerase B | Not tested | SPI-7 | Protein | 1e-144 | 50 |
| topB1 | YP_005176228.1 | DNA topoisomerase III | Not tested | ICEPmu1 | Protein | 2e-140 | 49 |
| PMI2630 | YP_002152332.1 | DNA topoisomerase III | Not tested | Not named | Protein | 6e-143 | 48 |
| topB | AAW83109.1 | TopB | Not tested | GGI | Protein | 4e-107 | 42 |
